Os10g0454500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Eggshell protein family protein.
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Os10g0454500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Eggshell protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.54 | 0.406 | 3.34 | 0.0379 | 0.16 | 2.53 | 0.209 | -10.5 | -0.0931 | 8.64 | 89.88 | 10 | 3 | 3 |
| 91 | 0.444 | 3.35 | 0.0413 | 0.132 | 1.34 | -0.836 | -- | -0.124 | 5.32 | 93.01 | 4 | 2.62 | 3.4 |
| 74.62 | 0.402 | 3.34 | 0.044 | 0.167 | 2.51 | -- | -10.4 | -0.093 | 7.94 | 89.82 | 10 | 3.01 | 3.01 |
| 91.62 | 0.446 | 3.36 | 0.018 | 0.115 | 1.29 | -- | -- | -0.172 | 7.96 | 94.34 | 4 | 2.23 | 4.72 |
| 76.1 | 0.406 | 3.35 | 0.0445 | -- | 2.57 | -- | -10.4 | -0.0926 | -- | 90 | 10 | 3 | 3.07 |
| 97.38 | 0.463 | 3.35 | 0.00724 | 0.217 | -- | -0.895 | -- | -0.122 | 5.47 | -- | -- | -- | -- |
| 98.78 | 0.465 | 3.34 | 0.0069 | 0.235 | -- | -- | -- | -0.117 | 7.08 | -- | -- | -- | -- |
| 92.47 | 0.448 | 3.36 | 0.018 | -- | 1.46 | -- | -- | -0.172 | -- | 94.34 | 4 | 2.23 | 4.72 |
| 91.53 | 0.446 | 3.36 | -- | 0.13 | 1.39 | -- | -- | -0.154 | 8.59 | 94 | 4 | 2.16 | 4.8 |
| 101.69 | 0.471 | 3.35 | 0.0115 | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
| 98.78 | 0.465 | 3.34 | -- | 0.235 | -- | -- | -- | -0.118 | 7.08 | -- | -- | -- | -- |
| 92.47 | 0.448 | 3.36 | -- | -- | 1.46 | -- | -- | -0.165 | -- | 94.22 | 4 | 2.12 | 4.82 |
| 101.7 | 0.471 | 3.35 | -- | -- | -- | -- | -- | -0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.90 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 11 | 76.99 | humidity | 80.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 19 | 77.03 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 70 | 79.73 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 80 | 79.73 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 134 | 81.98 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 171 | 84.41 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 173 | 84.43 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 191 | 85.45 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 4 |
| 241 | 86.99 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 6 |
| 242 | 87.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 245 | 87.05 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 249 | 87.12 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 354 | 88.22 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 356 | 88.23 | temperature | 20.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 360 | 88.42 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 372 | 88.58 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 375 | 88.60 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 390 | 88.73 | temperature | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 410 | 88.79 | radiation | 10.0 | 10 | < th | dose independent | sin | 12 | NA |
| 445 | 89.13 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 470 | 89.30 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 482 | 89.47 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 558 | 90.11 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 559 | 90.12 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 625 | 90.53 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 635 | 90.64 | temperature | 15.0 | 10 | > th | dose independent | rect. | 8 | 18 |
| 640 | 90.71 | wind | 3.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 642 | 90.73 | temperature | 15.0 | 10 | > th | dose independent | rect. | 6 | 23 |
| 648 | 90.75 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 656 | 90.80 | temperature | 15.0 | 30 | > th | dose independent | rect. | 6 | 20 |
| 672 | 90.92 | wind | 3.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 679 | 90.95 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 680 | 90.95 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 681 | 90.95 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 682 | 90.95 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 698 | 91.07 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 710 | 91.13 | wind | 7.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 715 | 91.17 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 722 | 91.20 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 24 | 9 |
| 732 | 91.25 | wind | 7.0 | 90 | > th | dose independent | rect. | 10 | 7 |
| 759 | 91.33 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 767 | 91.36 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 772 | 91.38 | wind | 7.0 | 90 | > th | dose independent | sin | 0 | NA |
| 777 | 91.40 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 4 |
| 841 | 91.57 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 843 | 91.57 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 881 | 91.65 | wind | 5.0 | 90 | > th | dose dependent | rect. | 9 | 7 |
| 884 | 91.66 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 886 | 91.66 | temperature | 15.0 | 720 | > th | dose independent | rect. | 13 | 5 |
| 893 | 91.67 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 6 |
| 899 | 91.69 | wind | 5.0 | 90 | > th | dose dependent | rect. | 7 | 9 |
| 933 | 91.76 | wind | 5.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 948 | 91.79 | wind | 7.0 | 90 | < th | dose independent | sin | 20 | NA |
| 970 | 91.81 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 11 |