Os10g0454000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0454000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 238.53 | 0.726 | 3.92 | 0.961 | 2.23 | -20.7 | 3 | -49.9 | -0.297 | 20.8 | 14.81 | 1232 | -- | -- |
| 240.78 | 0.723 | 4.13 | 1.31 | 2.21 | 2.81 | 2.67 | -- | -0.32 | 20.8 | 15.05 | 378 | -- | -- |
| 267.65 | 0.762 | 3.9 | 0.791 | 2.23 | -20.6 | -- | -48.5 | -0.305 | 20.8 | 14.94 | 1219 | -- | -- |
| 268.08 | 0.763 | 4.13 | 1.24 | 2.24 | 2.39 | -- | -- | -0.309 | 20.8 | 15.12 | 563 | -- | -- |
| 548.7 | 1.09 | 3.89 | 0.889 | -- | -21.1 | -- | -51.3 | -0.328 | -- | 14.7 | 1244 | -- | -- |
| 256.86 | 0.751 | 4.14 | 1.17 | 2.26 | -- | 2.73 | -- | -0.351 | 20.8 | -- | -- | -- | -- |
| 281.59 | 0.786 | 4.14 | 1.07 | 2.25 | -- | -- | -- | -0.352 | 20.8 | -- | -- | -- | -- |
| 548.6 | 1.09 | 4.06 | 1.28 | -- | 3.22 | -- | -- | -0.316 | -- | 14.71 | 1249 | -- | -- |
| 305.91 | 0.819 | 4.16 | -- | 2.23 | 1.76 | -- | -- | -0.462 | 20.8 | 15.12 | 563 | -- | -- |
| 570.5 | 1.12 | 4.08 | 1.07 | -- | -- | -- | -- | -0.369 | -- | -- | -- | -- | -- |
| 312.02 | 0.826 | 4.16 | -- | 2.25 | -- | -- | -- | -0.472 | 20.9 | -- | -- | -- | -- |
| 587.69 | 1.13 | 4.1 | -- | -- | 2.57 | -- | -- | -0.474 | -- | 14.71 | 1249 | -- | -- |
| 600.86 | 1.14 | 4.1 | -- | -- | -- | -- | -- | -0.488 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 226.22 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 12 |
| 2 | 226.67 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 10 |
| 12 | 227.12 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 14 |
| 13 | 227.24 | temperature | 15.0 | 720 | > th | dose independent | rect. | 11 | 10 |
| 30 | 228.59 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 13 |
| 41 | 229.61 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 12 |
| 43 | 229.68 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 44 | 229.94 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 51 | 230.22 | temperature | 25.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 59 | 230.52 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 62 | 230.82 | temperature | 15.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 76 | 231.02 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 12 |
| 82 | 231.30 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 23 | 12 |
| 91 | 231.44 | temperature | 15.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 131 | 231.94 | temperature | 15.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 132 | 231.94 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 137 | 232.04 | temperature | 20.0 | 90 | < th | dose independent | rect. | 15 | 10 |
| 148 | 232.18 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 10 |
| 174 | 232.51 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 21 |
| 205 | 232.78 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 7 |
| 207 | 232.78 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 13 |
| 212 | 232.82 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 247 | 233.10 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 20 |
| 255 | 233.29 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 3 |
| 289 | 233.67 | temperature | 20.0 | 720 | > th | dose independent | rect. | 11 | 1 |
| 335 | 234.19 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 340 | 234.27 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 353 | 234.40 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 6 |
| 355 | 234.43 | temperature | 20.0 | 10 | < th | dose independent | rect. | 12 | 13 |
| 359 | 234.46 | temperature | 20.0 | 30 | > th | dose independent | sin | 16 | NA |
| 375 | 234.54 | temperature | 20.0 | 10 | < th | dose independent | sin | 15 | NA |
| 381 | 234.64 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 3 |
| 394 | 234.76 | temperature | 20.0 | 90 | < th | dose independent | sin | 16 | NA |
| 401 | 234.80 | humidity | 90.0 | 720 | < th | dose independent | rect. | 11 | 1 |
| 403 | 234.81 | temperature | 10.0 | 10 | > th | dose dependent | sin | 15 | NA |
| 420 | 234.97 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 422 | 234.99 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 18 |
| 430 | 235.08 | temperature | 20.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 434 | 235.10 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 15 | 9 |
| 454 | 235.24 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 23 | 4 |
| 470 | 235.32 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 471 | 235.32 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 13 |
| 478 | 235.37 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 18 |
| 486 | 235.39 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 11 |
| 493 | 235.42 | wind | 9.0 | 720 | < th | dose independent | rect. | 12 | 23 |
| 496 | 235.43 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 19 |
| 516 | 235.60 | wind | 5.0 | 30 | < th | dose independent | rect. | 23 | 12 |
| 523 | 235.63 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 10 |
| 553 | 235.79 | wind | 9.0 | 720 | < th | dose independent | rect. | 12 | 15 |
| 562 | 235.86 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 14 |
| 565 | 235.86 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 7 | 18 |
| 574 | 235.89 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 576 | 235.91 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 583 | 235.93 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 616 | 236.07 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 11 |
| 634 | 236.18 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 23 | 4 |
| 649 | 236.23 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 14 |
| 656 | 236.29 | wind | 9.0 | 720 | < th | dose independent | rect. | 15 | 9 |
| 664 | 236.32 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 15 | 19 |
| 674 | 236.35 | wind | 1.0 | 720 | > th | dose independent | rect. | 11 | 1 |
| 692 | 236.40 | radiation | 30.0 | 10 | < th | dose independent | rect. | 23 | 12 |
| 696 | 236.41 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 698 | 236.41 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 23 | 12 |
| 752 | 236.65 | temperature | 20.0 | 10 | < th | dose independent | rect. | 22 | 2 |
| 759 | 236.70 | wind | 5.0 | 30 | < th | dose independent | rect. | 23 | 1 |
| 763 | 236.72 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 768 | 236.74 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 23 | 10 |
| 771 | 236.76 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 11 | 12 |
| 810 | 236.91 | wind | 9.0 | 720 | < th | dose independent | rect. | 12 | 6 |
| 873 | 237.07 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 896 | 237.15 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 23 | 1 |
| 898 | 237.15 | humidity | 60.0 | 30 | > th | dose independent | rect. | 23 | 12 |
| 902 | 237.17 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 917 | 237.23 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 18 | 3 |
| 920 | 237.24 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 938 | 237.29 | wind | 7.0 | 30 | < th | dose independent | rect. | 23 | 21 |
| 942 | 237.30 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 14 |
| 943 | 237.30 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 951 | 237.32 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 23 | 1 |
| 955 | 237.34 | radiation | 30.0 | 720 | < th | dose independent | rect. | 15 | 9 |
| 962 | 237.35 | temperature | 20.0 | 10 | > th | dose independent | rect. | 11 | 19 |
| 968 | 237.37 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 971 | 237.37 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 982 | 237.42 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 11 | 1 |
| 983 | 237.42 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 11 | 1 |
| 984 | 237.42 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 1 |
| 986 | 237.42 | temperature | 10.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 987 | 237.42 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 1 |
| 991 | 237.43 | humidity | 80.0 | 30 | > th | dose independent | rect. | 23 | 1 |
| 1000 | 237.45 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 1 |