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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0453000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Eggshell protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0227) R2 : 0.00284
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0545 (0.0478) R2dN8 : 0.00366 R2N8 : 0.00284
σ : 0.428
deviance : 83.98
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.68 0.419 2.96 0.165 0.12 -0.286 -0.0498 -0.687 0.1 4.68 21.09 1371 -- --
80.62 0.418 2.94 0.315 0.125 -0.221 -0.0828 -- 0.129 4.62 21 1292 -- --
79.68 0.416 2.96 0.164 0.119 -0.286 -- -0.69 0.1 4.59 21.1 1370 -- --
80.12 0.42 2.94 0.276 0.106 -0.176 -- -- 0.128 7.09 22.11 1211 -- --
80.44 0.418 2.97 0.164 -- -0.277 -- -0.697 0.1 -- 21.08 1372 -- --
81.88 0.424 2.95 0.226 0.114 -- -0.0635 -- 0.0768 4.88 -- -- -- --
81.89 0.424 2.95 0.226 0.113 -- -- -- 0.0771 4.79 -- -- -- --
80.69 0.42 2.94 0.274 -- -0.169 -- -- 0.128 -- 22 1242 -- --
81.96 0.424 2.95 -- 0.109 -0.141 -- -- 0.092 6.28 22.48 1239 -- --
82.57 0.425 2.96 0.231 -- -- -- -- 0.08 -- -- -- -- --
83.24 0.427 2.96 -- 0.118 -- -- -- 0.0519 4.73 -- -- -- --
82.58 0.425 2.95 -- -- -0.14 -- -- 0.0938 -- 22.48 1239 -- --
83.98 0.428 2.96 -- -- -- -- -- 0.0545 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 75.04 radiation 40.0 90 > th dose dependent rect. 8 1
19 75.25 radiation 1.0 43200 < th dose dependent rect. 3 1
20 75.27 wind 3.0 30 < th dose independent rect. 2 1
21 75.28 atmosphere 1005.0 30 > th dose independent rect. 2 1
22 75.28 wind 3.0 30 < th dose dependent rect. 2 1
24 75.29 temperature 20.0 30 > th dose dependent rect. 2 1
25 75.29 atmosphere 1005.0 30 > th dose dependent rect. 2 1
35 75.35 humidity 50.0 30 > th dose dependent rect. 2 1
37 75.36 temperature 10.0 30 > th dose independent rect. 2 1
39 75.36 temperature 30.0 30 < th dose independent rect. 2 1
40 75.36 humidity 50.0 30 > th dose independent rect. 2 1
43 75.36 atmosphere 995.0 30 > th dose independent rect. 2 1
45 75.36 atmosphere 1010.0 30 < th dose independent rect. 2 1
47 75.36 radiation 1.0 30 < th dose independent rect. 2 1
52 75.36 precipitation 0.1 30 < th dose independent rect. 2 1
53 75.36 temperature 10.0 30 > th dose independent rect. 3 23
56 75.36 radiation 1.0 30 < th dose dependent rect. 2 1
61 75.36 precipitation 0.1 30 < th dose dependent rect. 2 1
70 75.46 atmosphere 1015.0 30 < th dose dependent rect. 2 1
76 75.55 temperature 30.0 30 < th dose dependent rect. 2 1
85 75.67 wind 1.0 30 > th dose independent rect. 2 1
92 75.72 wind 9.0 1440 < th dose independent rect. 3 1
93 75.72 temperature 10.0 1440 > th dose independent rect. 3 1
96 75.72 temperature 30.0 1440 < th dose independent rect. 3 1
100 75.72 humidity 50.0 1440 > th dose independent rect. 3 1
109 75.72 atmosphere 995.0 1440 > th dose independent rect. 3 1
110 75.72 radiation 1.0 1440 < th dose independent rect. 3 1
130 75.72 temperature 10.0 1440 > th dose independent rect. 4 23
133 75.72 radiation 1.0 1440 < th dose dependent rect. 3 1
180 76.14 temperature 25.0 90 > th dose dependent rect. 1 3
184 76.22 atmosphere 995.0 30 > th dose independent rect. 3 23
185 76.41 wind 9.0 30 < th dose independent rect. 3 23
197 77.01 wind 7.0 90 > th dose independent rect. 1 8
200 77.02 wind 7.0 90 > th dose dependent rect. 1 8
204 77.05 wind 7.0 90 > th dose independent rect. 8 1
209 77.05 wind 7.0 90 > th dose dependent rect. 8 1
214 77.15 precipitation 0.1 30 < th dose independent rect. 3 23
215 77.15 precipitation 0.1 30 < th dose dependent rect. 3 23
251 78.18 temperature 10.0 30 > th dose dependent rect. 3 23
252 78.19 humidity 50.0 30 > th dose independent rect. 3 23
260 78.35 radiation 1.0 270 < th dose independent rect. 13 4
277 78.50 humidity 90.0 10 > th dose independent rect. 17 1
287 78.50 humidity 90.0 10 > th dose dependent rect. 17 1
297 78.52 precipitation 0.1 10 > th dose independent rect. 17 1
325 78.52 precipitation 0.1 10 > th dose dependent rect. 17 1
359 78.60 precipitation 0.1 270 > th dose independent rect. 17 1
361 78.61 precipitation 0.1 270 > th dose dependent rect. 17 1
364 78.66 temperature 15.0 30 > th dose dependent rect. 10 23
380 78.76 temperature 25.0 270 < th dose independent rect. 13 5
399 78.86 temperature 25.0 270 < th dose independent rect. 12 9
403 78.89 temperature 30.0 270 < th dose dependent rect. 13 18
404 78.90 radiation 40.0 90 > th dose independent rect. 8 1
423 78.92 temperature 25.0 10 < th dose dependent sin 22 NA
437 78.99 wind 1.0 90 < th dose dependent rect. 4 1
446 79.02 radiation 20.0 270 > th dose independent rect. 6 1
473 79.04 temperature 25.0 270 < th dose dependent rect. 13 4
481 79.06 wind 1.0 90 < th dose independent rect. 4 1
530 79.10 temperature 25.0 270 < th dose dependent rect. 12 6
542 79.10 temperature 15.0 30 > th dose dependent rect. 10 16
556 79.12 temperature 30.0 30 < th dose independent rect. 3 23
557 79.12 wind 3.0 30 < th dose dependent rect. 2 3
567 79.16 temperature 25.0 30 > th dose independent rect. 10 23
574 79.18 temperature 25.0 10 < th dose dependent rect. 9 9
593 79.25 temperature 30.0 10 > th dose independent rect. 10 1
631 79.32 temperature 30.0 10 < th dose dependent rect. 13 22
634 79.33 humidity 80.0 270 > th dose dependent rect. 16 1
638 79.34 humidity 90.0 10 < th dose independent rect. 10 11
639 79.34 radiation 1.0 270 < th dose dependent rect. 15 2
653 79.36 humidity 80.0 270 > th dose independent rect. 16 1
654 79.36 humidity 90.0 1440 > th dose independent rect. 2 2
660 79.37 atmosphere 1015.0 30 < th dose independent rect. 3 23
661 79.37 temperature 25.0 270 < th dose dependent rect. 15 1
673 79.39 atmosphere 1015.0 1440 < th dose independent rect. 19 2
675 79.39 atmosphere 1015.0 1440 < th dose independent rect. 15 6
689 79.41 temperature 20.0 1440 > th dose independent rect. 22 8
695 79.42 temperature 20.0 1440 > th dose independent rect. 2 2
697 79.43 temperature 20.0 1440 < th dose independent rect. 2 2
713 79.44 temperature 15.0 30 > th dose dependent rect. 10 18
741 79.47 humidity 90.0 90 < th dose independent rect. 2 1
755 79.48 radiation 20.0 270 > th dose dependent rect. 6 1
770 79.49 atmosphere 1015.0 1440 > th dose independent rect. 20 1
782 79.50 temperature 20.0 1440 < th dose independent rect. 22 8
785 79.50 temperature 25.0 10 < th dose dependent rect. 4 20
803 79.51 temperature 25.0 30 > th dose independent rect. 10 21
804 79.51 temperature 25.0 10 < th dose independent rect. 13 22
844 79.54 temperature 25.0 270 > th dose independent rect. 10 12
852 79.55 humidity 70.0 30 < th dose independent rect. 9 1
945 79.61 temperature 25.0 270 < th dose independent rect. 13 18
947 79.61 humidity 90.0 30 < th dose dependent rect. 9 1
952 79.61 temperature 25.0 90 < th dose dependent rect. 4 19
965 79.62 temperature 25.0 720 < th dose independent rect. 7 13
998 79.65 temperature 25.0 720 > th dose independent rect. 15 7
1000 79.65 temperature 20.0 1440 > th dose independent rect. 22 16