Os10g0452700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Eggshell protein family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0452700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Eggshell protein family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.33 | 0.388 | -1310 | 8030 | 0.0965 | -330000 | -0.0704 | 2010000 | 0.0475 | 5.78 | 995 | 90 | -- | -- |
| 83.52 | 0.429 | 3.12 | 0.115 | 0.0619 | 1.81 | -0.189 | -- | 0.0397 | 5.64 | 995 | 90 | -- | -- |
| 69.34 | 0.388 | -1310 | 8030 | 0.0963 | -330000 | -- | 2010000 | 0.0478 | 5.84 | 995 | 90 | -- | -- |
| 59.94 | 0.361 | 3.13 | 0.0627 | 0.0142 | 5.08 | -- | -- | 0.0329 | 11.2 | 994.5 | 224 | -- | -- |
| 69.81 | 0.389 | -1310 | 8030 | -- | -330000 | -- | 2010000 | 0.0498 | -- | 995 | 90 | -- | -- |
| 87.1 | 0.438 | 3.12 | 0.129 | 0.0395 | -- | -0.265 | -- | 0.0346 | 5.55 | -- | -- | -- | -- |
| 87.27 | 0.437 | 3.12 | 0.128 | 0.0394 | -- | -- | -- | 0.0358 | 6.51 | -- | -- | -- | -- |
| 59.87 | 0.36 | 3.12 | 0.101 | -- | 5.25 | -- | -- | 0.0483 | -- | 994.5 | 218 | -- | -- |
| 59.69 | 0.36 | 3.12 | -- | 0.0942 | 5.31 | -- | -- | 0.0353 | 6.22 | 994.6 | 211 | -- | -- |
| 87.35 | 0.437 | 3.12 | 0.129 | -- | -- | -- | -- | 0.0366 | -- | -- | -- | -- | -- |
| 87.7 | 0.438 | 3.13 | -- | 0.0411 | -- | -- | -- | 0.0215 | 6.33 | -- | -- | -- | -- |
| 60.14 | 0.361 | 3.12 | -- | -- | 5.26 | -- | -- | 0.0371 | -- | 994.5 | 214 | -- | -- |
| 87.79 | 0.437 | 3.13 | -- | -- | -- | -- | -- | 0.0223 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.23 | temperature | 30 | 10 | > th | dose independent | rect. | 17 | 1 |
| 2 | 59.34 | atmosphere | 995 | 30 | > th | dose independent | sin | 8 | NA |
| 4 | 59.38 | atmosphere | 995 | 90 | < th | dose dependent | sin | 9 | NA |
| 5 | 59.38 | atmosphere | 995 | 30 | < th | dose dependent | rect. | 16 | 2 |
| 30 | 59.40 | atmosphere | 995 | 30 | < th | dose independent | sin | 8 | NA |
| 33 | 59.42 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 1 |
| 371 | 59.68 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 1 |
| 468 | 60.19 | temperature | 30 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 487 | 60.43 | temperature | 30 | 90 | > th | dose dependent | rect. | 16 | 17 |
| 510 | 61.05 | radiation | 10 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 545 | 61.93 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 1 |
| 633 | 65.65 | atmosphere | 995 | 10 | > th | dose independent | rect. | 3 | 23 |
| 771 | 67.90 | humidity | 70 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 772 | 67.95 | temperature | 30 | 10 | > th | dose independent | sin | 11 | NA |
| 798 | 69.00 | temperature | 30 | 10 | < th | dose independent | sin | 11 | NA |
| 804 | 69.35 | atmosphere | 995 | 90 | < th | dose dependent | no | NA | NA |