Os10g0452400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Eggshell protein family protein.
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Os10g0452400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Eggshell protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 230.41 | 0.713 | 2.16 | -3.24 | 0.161 | -178 | 1.18 | -863 | -0.127 | 15.1 | 9.047 | 96 | 22 | 12 |
| 24216.81 | 7.25 | 3.56 | -0.147 | 1.52 | -153 | -5.55 | -- | -1.65 | 16.3 | 9.219 | 48 | 1.68 | 4.73 |
| 234.99 | 0.714 | 2.16 | -3.22 | 0.166 | -178 | -- | -862 | -0.121 | 14.6 | 9.044 | 95 | 22 | 12 |
| 16469.94 | 5.98 | 2.37 | -6.55 | 0.121 | -123 | -- | -- | 0.393 | 18 | 9.225 | 100 | 23 | 4.81 |
| 236.58 | 0.716 | 2.16 | -3.23 | -- | -178 | -- | -862 | -0.125 | -- | 9.044 | 95 | 22 | 12 |
| 259.57 | 0.755 | 2.89 | 0.13 | 0.127 | -- | 1.32 | -- | -0.156 | 15.1 | -- | -- | -- | -- |
| 265.32 | 0.763 | 2.89 | 0.158 | 0.132 | -- | -- | -- | -0.148 | 15.1 | -- | -- | -- | -- |
| 10646.46 | 4.81 | 3.1 | -4.6 | -- | -100 | -- | -- | -0.264 | -- | 9.084 | 79 | 22 | 11.2 |
| 8051.9 | 4.18 | 4.08 | -- | 1.45 | -78.8 | -- | -- | -4.88 | 2.84 | 9.2 | 117 | 22.7 | 10.5 |
| 266.32 | 0.763 | 2.89 | 0.152 | -- | -- | -- | -- | -0.152 | -- | -- | -- | -- | -- |
| 265.98 | 0.763 | 2.89 | -- | 0.129 | -- | -- | -- | -0.166 | 15.1 | -- | -- | -- | -- |
| 266.86 | 0.761 | 2.89 | -- | -- | -0.277 | -- | -- | -0.17 | -- | 8.385 | 16 | 22.7 | 9.1 |
| 266.93 | 0.763 | 2.89 | -- | -- | -- | -- | -- | -0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 230.47 | wind | 9 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 2 | 232.18 | wind | 9 | 90 | > th | dose independent | rect. | 22 | 12 |
| 3 | 233.19 | wind | 9 | 1440 | > th | dose independent | rect. | 22 | 4 |
| 11 | 233.19 | wind | 9 | 1440 | > th | dose dependent | rect. | 22 | 4 |
| 19 | 233.39 | wind | 9 | 720 | > th | dose independent | rect. | 22 | 1 |
| 23 | 233.39 | wind | 9 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 101 | 235.48 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 102 | 235.52 | wind | 7 | 90 | > th | dose independent | rect. | 8 | 1 |
| 139 | 242.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 1 |
| 181 | 243.32 | wind | 1 | 30 | < th | dose dependent | rect. | 13 | 11 |
| 199 | 243.47 | wind | 1 | 30 | < th | dose dependent | rect. | 10 | 14 |
| 270 | 244.50 | humidity | 80 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 278 | 244.63 | wind | 5 | 90 | > th | dose dependent | rect. | 22 | 13 |
| 279 | 244.70 | humidity | 80 | 10 | < th | dose independent | rect. | 3 | 3 |
| 345 | 245.26 | humidity | 50 | 90 | < th | dose dependent | rect. | 12 | 2 |
| 348 | 245.37 | humidity | 80 | 10 | < th | dose independent | rect. | 5 | 1 |
| 353 | 245.37 | humidity | 80 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 391 | 245.48 | humidity | 50 | 90 | < th | dose independent | rect. | 11 | 3 |
| 477 | 246.08 | wind | 7 | 270 | > th | dose independent | rect. | 19 | 16 |
| 496 | 246.11 | wind | 7 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 506 | 246.28 | humidity | 50 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 620 | 246.67 | humidity | 50 | 10 | < th | dose independent | rect. | 13 | 5 |
| 663 | 246.92 | wind | 5 | 90 | > th | dose independent | rect. | 22 | 13 |
| 675 | 247.11 | temperature | 25 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 711 | 247.38 | humidity | 50 | 90 | < th | dose dependent | sin | 7 | NA |
| 774 | 247.64 | radiation | 1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 784 | 247.64 | radiation | 1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 795 | 247.65 | wind | 3 | 10 | > th | dose independent | rect. | 9 | 1 |
| 844 | 248.11 | humidity | 90 | 90 | > th | dose independent | rect. | 9 | 1 |
| 845 | 248.11 | humidity | 90 | 90 | > th | dose dependent | rect. | 9 | 1 |
| 865 | 248.40 | wind | 3 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 870 | 248.43 | temperature | 25 | 90 | < th | dose independent | rect. | 8 | 1 |
| 907 | 248.72 | wind | 5 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 936 | 249.00 | wind | 5 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 938 | 249.01 | wind | 5 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 945 | 249.06 | wind | 1 | 30 | < th | dose dependent | rect. | 21 | 3 |
| 953 | 249.13 | wind | 5 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 961 | 249.15 | wind | 1 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 973 | 249.21 | wind | 3 | 14400 | > th | dose dependent | rect. | 7 | 3 |