Os10g0450800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0450800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 202.88 | 0.669 | 11.9 | -1.1 | 0.915 | -1.08 | 0.242 | -1.69 | 0.402 | 8.48 | 72 | 1556 | -- | -- |
| 199.1 | 0.657 | 11.9 | -1.26 | 0.895 | -1.46 | 0.207 | -- | 0.276 | 8.55 | 75.99 | 3028 | -- | -- |
| 203.06 | 0.664 | 11.9 | -1.1 | 0.913 | -1.08 | -- | -1.71 | 0.401 | 8.51 | 72 | 1556 | -- | -- |
| 198.49 | 0.656 | 11.9 | -1.21 | 0.92 | -1.64 | -- | -- | 0.218 | 8.54 | 75.44 | 3059 | -- | -- |
| 248.75 | 0.735 | 11.9 | -1.1 | -- | -1.12 | -- | -1.73 | 0.384 | -- | 73.15 | 1496 | -- | -- |
| 252.34 | 0.745 | 11.9 | -1.14 | 0.915 | -- | 0.226 | -- | 0.472 | 8.93 | -- | -- | -- | -- |
| 252.51 | 0.744 | 11.9 | -1.13 | 0.914 | -- | -- | -- | 0.472 | 8.96 | -- | -- | -- | -- |
| 243.88 | 0.727 | 11.9 | -1.22 | -- | -1.62 | -- | -- | 0.249 | -- | 75 | 2968 | -- | -- |
| 236.22 | 0.716 | 11.9 | -- | 0.994 | -1.65 | -- | -- | 0.328 | 8.5 | 75.46 | 3204 | -- | -- |
| 300.35 | 0.81 | 11.9 | -1.13 | -- | -- | -- | -- | 0.478 | -- | -- | -- | -- | -- |
| 286.28 | 0.791 | 11.8 | -- | 0.912 | -- | -- | -- | 0.598 | 9.06 | -- | -- | -- | -- |
| 281 | 0.781 | 11.9 | -- | -- | -1.69 | -- | -- | 0.412 | -- | 76 | 2998 | -- | -- |
| 334.2 | 0.853 | 11.9 | -- | -- | -- | -- | -- | 0.604 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.44 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 2 | 188.00 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 9 | 188.95 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 10 | 188.96 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 16 | 189.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 27 | 189.63 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 9 |
| 36 | 189.98 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 40 | 190.03 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 56 | 190.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 105 | 191.54 | wind | 3.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 110 | 191.60 | wind | 3.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 142 | 192.34 | wind | 5.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 148 | 192.44 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 13 |
| 152 | 192.52 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 153 | 192.55 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 154 | 192.55 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 156 | 192.64 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 24 | 10 |
| 168 | 192.84 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 254 | 193.90 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 257 | 193.92 | wind | 1.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 288 | 194.21 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 8 |
| 321 | 194.47 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 10 |
| 339 | 194.60 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 367 | 194.77 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 14 |
| 400 | 195.09 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 401 | 195.09 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 423 | 195.20 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 433 | 195.24 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 9 |
| 441 | 195.26 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 500 | 195.61 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 540 | 195.79 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 542 | 195.79 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 16 |
| 625 | 196.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 18 |
| 702 | 196.65 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 704 | 196.65 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 17 |
| 744 | 196.89 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 761 | 196.99 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 800 | 197.18 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 825 | 197.33 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 837 | 197.34 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 872 | 197.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 12 |
| 873 | 197.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 12 |
| 874 | 197.68 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 875 | 197.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 12 |
| 885 | 197.76 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 919 | 197.94 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 951 | 198.17 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 979 | 198.26 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 9 |
| 994 | 198.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 995 | 198.32 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 996 | 198.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 10 |
| 999 | 198.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 10 |