Os10g0447600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MT-A70 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0447600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : MT-A70 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.67 | 0.303 | 9.67 | 0.335 | 0.852 | -1.04 | 0.107 | -0.898 | 0.166 | 18.4 | 1.095 | 12987 | -- | -- |
| 42.48 | 0.304 | 9.67 | 0.526 | 0.859 | -0.906 | 0.142 | -- | 0.178 | 18.4 | 1.23 | 13004 | -- | -- |
| 41.46 | 0.3 | 9.67 | 0.309 | 0.851 | -1.04 | -- | -0.877 | 0.168 | 18.4 | 1.17 | 13038 | -- | -- |
| 42.42 | 0.303 | 9.66 | 0.525 | 0.849 | -0.906 | -- | -- | 0.178 | 18.2 | 1.23 | 13004 | -- | -- |
| 79.26 | 0.415 | 9.67 | 0.319 | -- | -1.08 | -- | -0.839 | 0.172 | -- | 1.18 | 12994 | -- | -- |
| 61.41 | 0.367 | 9.7 | 0.183 | 0.868 | -- | 0.147 | -- | -0.0451 | 18.3 | -- | -- | -- | -- |
| 61.46 | 0.367 | 9.7 | 0.181 | 0.869 | -- | -- | -- | -0.0446 | 18.3 | -- | -- | -- | -- |
| 80.69 | 0.418 | 9.66 | 0.505 | -- | -0.937 | -- | -- | 0.166 | -- | 1.275 | 13008 | -- | -- |
| 48.35 | 0.324 | 9.66 | -- | 0.869 | -0.82 | -- | -- | 0.173 | 18.2 | 1.649 | 11623 | -- | -- |
| 100.67 | 0.469 | 9.69 | 0.158 | -- | -- | -- | -- | -0.0633 | -- | -- | -- | -- | -- |
| 62.33 | 0.369 | 9.71 | -- | 0.867 | -- | -- | -- | -0.0648 | 18.3 | -- | -- | -- | -- |
| 85.97 | 0.432 | 9.65 | -- | -- | -0.784 | -- | -- | 0.166 | -- | 1.581 | 12995 | -- | -- |
| 101.33 | 0.47 | 9.69 | -- | -- | -- | -- | -- | -0.0808 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.53 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 2 | 39.57 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 5 | 39.67 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 6 | 39.67 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 8 | 39.69 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 10 | 39.71 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 15 | 39.75 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 21 | 39.78 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 29 | 39.84 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 35 | 39.87 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 46 | 39.90 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 48 | 39.90 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 66 | 39.96 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 86 | 40.04 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 108 | 40.09 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 115 | 40.11 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 15 |
| 122 | 40.13 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 125 | 40.14 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 14 |
| 129 | 40.17 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 140 | 40.19 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 158 | 40.24 | humidity | 90 | 43200 | < th | dose independent | sin | 19 | NA |
| 173 | 40.28 | humidity | 90 | 43200 | > th | dose independent | sin | 19 | NA |
| 176 | 40.28 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 10 |
| 189 | 40.30 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 194 | 40.31 | humidity | 70 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 208 | 40.34 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 213 | 40.35 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 231 | 40.39 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 251 | 40.42 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 16 |
| 277 | 40.46 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 19 |
| 327 | 40.53 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 361 | 40.57 | humidity | 70 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 370 | 40.58 | humidity | 90 | 43200 | > th | dose dependent | sin | 19 | NA |
| 374 | 40.59 | temperature | 20 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 394 | 40.61 | humidity | 90 | 43200 | < th | dose independent | rect. | 3 | 20 |
| 418 | 40.64 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 448 | 40.67 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 459 | 40.69 | humidity | 80 | 43200 | > th | dose dependent | sin | 21 | NA |
| 486 | 40.72 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 550 | 40.79 | wind | 3 | 43200 | > th | dose dependent | rect. | 8 | 6 |
| 551 | 40.79 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 624 | 40.88 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 641 | 40.90 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 657 | 40.92 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 659 | 40.92 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 675 | 40.94 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 696 | 40.95 | wind | 3 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 713 | 40.97 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 724 | 40.99 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 10 |
| 730 | 41.00 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 738 | 41.01 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 739 | 41.01 | temperature | 20 | 43200 | < th | dose independent | rect. | 12 | 10 |
| 746 | 41.02 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 777 | 41.03 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 793 | 41.04 | humidity | 90 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 796 | 41.04 | temperature | 25 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 809 | 41.05 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 813 | 41.06 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 814 | 41.06 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 854 | 41.08 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 864 | 41.08 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 869 | 41.09 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 876 | 41.09 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 910 | 41.10 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 914 | 41.10 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 930 | 41.11 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 17 |
| 954 | 41.12 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 18 |
| 958 | 41.12 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 959 | 41.12 | humidity | 90 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 963 | 41.12 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 972 | 41.13 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 16 |
| 976 | 41.13 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 17 |