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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0447200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.05 (0.038) R2 : 0.124
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.987 (0.121) R2dE : 0.125 R2E : 0.123
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0473 (0.0804) R2dN8 : 0.00131 R2N8 : -0.00151
σ : 0.712
deviance : 233.63
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 23.26
memory length : 4329
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
232.41 0.716 4.05 0.149 0.0314 -1.34 -0.457 -0.851 0.151 16 10.27 4355 -- --
233.09 0.711 4.02 0.342 0.0321 -1.3 -0.43 -- 0.203 15.9 10.2 4342 -- --
232.97 0.711 4.04 0.173 0.0408 -1.34 -- -0.741 0.156 13.6 10.8 4373 -- --
233.57 0.712 4.02 0.337 0.0405 -1.3 -- -- 0.2 13.4 10.4 4355 -- --
233.06 0.711 4.05 0.149 -- -1.34 -- -0.816 0.15 -- 10.2 4345 -- --
263.72 0.761 4.07 -0.259 0.0951 -- -0.393 -- -0.0527 15.3 -- -- -- --
264.14 0.761 4.07 -0.266 0.0965 -- -- -- -0.0552 13.9 -- -- -- --
233.67 0.712 4.02 0.336 -- -1.3 -- -- 0.201 -- 9.249 4334 -- --
235.83 0.715 4.03 -- 0.0412 -1.13 -- -- 0.138 13.2 10.02 4332 -- --
264.7 0.76 4.08 -0.27 -- -- -- -- -0.0575 -- -- -- -- --
266.01 0.763 4.07 -- 0.101 -- -- -- -0.0256 14 -- -- -- --
233.63 0.712 4.05 -- -- -0.987 -- -- 0.0473 -- 23.26 4329 -- --
266.63 0.762 4.07 -- -- -- -- -- -0.0275 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 227.16 temperature 25 4320 > th dose dependent rect. 7 2
13 228.68 wind 9 43200 < th dose independent rect. 18 14
21 229.03 wind 9 43200 > th dose independent rect. 18 14
25 229.20 temperature 10 720 > th dose dependent rect. 19 19
28 229.39 temperature 10 720 > th dose dependent rect. 19 12
35 229.52 temperature 10 720 > th dose dependent rect. 19 14
36 229.53 wind 9 43200 > th dose dependent rect. 19 13
57 229.95 wind 9 43200 > th dose dependent rect. 17 15
91 230.47 temperature 25 4320 > th dose independent rect. 19 5
93 230.49 temperature 25 4320 < th dose independent rect. 19 5
94 230.49 temperature 25 4320 > th dose dependent sin 8 NA
98 230.53 temperature 25 4320 > th dose independent rect. 7 1
103 230.56 wind 9 43200 < th dose independent rect. 20 5
112 230.68 temperature 25 4320 > th dose independent rect. 19 3
118 230.75 wind 9 43200 < th dose independent rect. 19 7
151 231.04 wind 9 43200 > th dose independent sin 11 NA
152 231.04 temperature 25 4320 < th dose independent rect. 19 14
157 231.09 temperature 30 4320 < th dose dependent rect. 3 1
158 231.09 wind 9 43200 > th dose dependent rect. 14 17
169 231.14 wind 9 43200 < th dose independent sin 11 NA
185 231.21 temperature 20 4320 > th dose dependent rect. 24 1
201 231.25 temperature 10 4320 > th dose dependent rect. 3 1
205 231.27 temperature 20 4320 > th dose dependent rect. 3 1
210 231.31 temperature 25 4320 > th dose independent rect. 19 14
216 231.33 temperature 10 4320 > th dose dependent rect. 19 15
223 231.37 wind 9 43200 > th dose independent rect. 19 5
232 231.39 temperature 10 4320 > th dose dependent rect. 24 10
233 231.39 temperature 30 4320 < th dose dependent rect. 19 14
237 231.40 temperature 10 4320 > th dose dependent rect. 18 10
242 231.41 temperature 30 4320 < th dose dependent rect. 18 10
255 231.44 wind 7 43200 > th dose dependent rect. 17 19
277 231.49 temperature 30 4320 < th dose dependent rect. 24 9
282 231.50 wind 9 43200 > th dose independent rect. 19 7
303 231.53 temperature 25 4320 > th dose dependent rect. 19 1
316 231.55 temperature 10 4320 > th dose dependent sin 9 NA
340 231.57 temperature 30 720 < th dose dependent rect. 17 17
348 231.59 temperature 20 4320 > th dose dependent rect. 19 9
364 231.61 temperature 30 270 < th dose dependent rect. 21 14
399 231.65 temperature 20 4320 > th dose dependent rect. 19 7
405 231.66 temperature 15 720 > th dose dependent sin 10 NA
415 231.67 temperature 10 4320 > th dose dependent rect. 24 1
434 231.69 temperature 30 4320 < th dose dependent sin 10 NA
478 231.74 temperature 30 4320 < th dose dependent rect. 24 4
485 231.75 temperature 20 4320 > th dose dependent rect. 24 4
500 231.76 temperature 10 4320 > th dose dependent rect. 24 4
568 231.82 wind 9 43200 > th dose independent rect. 17 7
570 231.82 temperature 30 4320 < th dose dependent rect. 24 1
587 231.83 temperature 10 4320 > th dose dependent rect. 6 3
602 231.84 wind 9 43200 > th dose independent rect. 17 9
616 231.85 wind 7 43200 > th dose dependent rect. 20 5
647 231.88 temperature 30 4320 < th dose dependent rect. 6 3
694 231.93 temperature 25 4320 < th dose independent rect. 7 1
696 231.93 temperature 25 4320 < th dose independent rect. 14 19
798 232.01 wind 9 43200 > th dose dependent rect. 17 9
865 232.07 temperature 10 4320 > th dose dependent rect. 20 1
869 232.07 wind 9 43200 > th dose dependent rect. 17 7
881 232.08 temperature 25 4320 < th dose independent sin 12 NA
882 232.08 temperature 30 720 < th dose dependent sin 10 NA
982 232.16 wind 7 43200 > th dose dependent sin 10 NA