Os10g0446100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0446100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.94 | 0.304 | 10.6 | 1.14 | 1.09 | -1.03 | 0.0599 | 1.91 | 0.306 | 16.4 | 23.7 | 1293 | -- | -- |
| 43.09 | 0.306 | 10.7 | 0.65 | 1.12 | -0.924 | 0.014 | -- | 0.213 | 16.5 | 20.18 | 1221 | -- | -- |
| 41.94 | 0.302 | 10.6 | 1.13 | 1.09 | -1.03 | -- | 1.88 | 0.307 | 16.4 | 23.65 | 1288 | -- | -- |
| 43 | 0.305 | 10.7 | 0.642 | 1.09 | -0.952 | -- | -- | 0.22 | 16.5 | 20.37 | 1198 | -- | -- |
| 103.45 | 0.474 | 10.6 | 1.26 | -- | -1.23 | -- | 2.03 | 0.366 | -- | 22.74 | 1229 | -- | -- |
| 69.09 | 0.39 | 10.7 | 0.324 | 1.2 | -- | 0.0901 | -- | 0.0101 | 16.1 | -- | -- | -- | -- |
| 69.11 | 0.389 | 10.7 | 0.325 | 1.2 | -- | -- | -- | 0.0106 | 16.1 | -- | -- | -- | -- |
| 104.69 | 0.477 | 10.7 | 0.636 | -- | -1.09 | -- | -- | 0.159 | -- | 23.82 | 1231 | -- | -- |
| 52.53 | 0.338 | 10.7 | -- | 1.11 | -0.76 | -- | -- | 0.0948 | 16.5 | 21.94 | 1181 | -- | -- |
| 146.93 | 0.566 | 10.7 | 0.276 | -- | -- | -- | -- | -0.0213 | -- | -- | -- | -- | -- |
| 71.89 | 0.397 | 10.7 | -- | 1.19 | -- | -- | -- | -0.0256 | 16.1 | -- | -- | -- | -- |
| 114.43 | 0.498 | 10.7 | -- | -- | -0.947 | -- | -- | 0.0616 | -- | 24.1 | 1229 | -- | -- |
| 148.94 | 0.57 | 10.7 | -- | -- | -- | -- | -- | -0.0519 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 5 | 38.50 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 12 | 39.10 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 26 | 40.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 34 | 40.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 21 |
| 44 | 41.43 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 63 | 41.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 69 | 41.66 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 15 |
| 99 | 41.84 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 112 | 41.92 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 238 | 42.41 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 311 | 42.60 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 328 | 42.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 21 |
| 354 | 42.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 16 |
| 433 | 42.81 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 20 |
| 443 | 42.82 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 483 | 42.84 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 495 | 42.86 | temperature | 20 | 720 | > th | dose dependent | sin | 10 | NA |
| 597 | 43.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 705 | 43.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 782 | 43.31 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 817 | 43.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 875 | 43.46 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 19 |
| 937 | 43.56 | temperature | 15 | 10 | > th | dose dependent | rect. | 14 | 17 |