Os10g0445900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0445900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.94 | 0.554 | 8.45 | 3.12 | 0.265 | -1.32 | -0.149 | -2.18 | 0.937 | 2.21 | 0.7293 | 11557 | -- | -- |
| 142.4 | 0.556 | 8.46 | 2.85 | 0.418 | -0.854 | 0.00338 | -- | 0.946 | 2.36 | 1.569 | 14835 | -- | -- |
| 135.81 | 0.543 | 8.43 | 3.09 | 0.215 | -1.36 | -- | -2.43 | 0.964 | 1.9 | 0.01886 | 12969 | -- | -- |
| 139.56 | 0.55 | 8.52 | 2.68 | 0.443 | -1.01 | -- | -- | 0.827 | 1.87 | 1.329 | 16204 | -- | -- |
| 136.85 | 0.545 | 8.42 | 2.83 | -- | -1.5 | -- | -2.43 | 0.93 | -- | 2.825e-06 | 17206 | -- | -- |
| 156.81 | 0.587 | 8.47 | 3.1 | 0.275 | -- | -0.118 | -- | 1.06 | 2.34 | -- | -- | -- | -- |
| 156.86 | 0.587 | 8.47 | 3.1 | 0.274 | -- | -- | -- | 1.06 | 2.29 | -- | -- | -- | -- |
| 140.84 | 0.553 | 8.55 | 2.42 | -- | -0.937 | -- | -- | 0.751 | -- | 1.15 | 30060 | -- | -- |
| 175.03 | 0.616 | 8.71 | -- | 0.234 | -2.43 | -- | -- | 0.037 | 1.47 | 2.942e-06 | 47520 | -- | -- |
| 161.32 | 0.593 | 8.47 | 3.11 | -- | -- | -- | -- | 1.06 | -- | -- | -- | -- | -- |
| 410.05 | 0.947 | 8.55 | -- | 0.334 | -- | -- | -- | 0.712 | 2.47 | -- | -- | -- | -- |
| 178.05 | 0.621 | 8.7 | -- | -- | -2.41 | -- | -- | 0.0552 | -- | 0.007349 | 47520 | -- | -- |
| 416.62 | 0.953 | 8.55 | -- | -- | -- | -- | -- | 0.719 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.30 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 8 | 132.47 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 12 | 132.52 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 24 | 132.85 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 49 | 133.08 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 58 | 133.11 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 109 | 133.28 | atmosphere | 1000 | 43200 | > th | dose dependent | sin | 12 | NA |
| 132 | 133.32 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 135 | 133.33 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 156 | 133.35 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 180 | 133.37 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 262 | 133.48 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 292 | 133.51 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 336 | 133.55 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 387 | 133.58 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 410 | 133.59 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 5 | 20 |
| 427 | 133.60 | atmosphere | 1000 | 43200 | > th | dose dependent | no | NA | NA |
| 516 | 133.65 | wind | 3 | 43200 | < th | dose dependent | rect. | 19 | 4 |
| 531 | 133.66 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 8 |
| 613 | 133.72 | atmosphere | 1015 | 43200 | < th | dose dependent | sin | 12 | NA |
| 984 | 133.94 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 988 | 133.94 | wind | 7 | 43200 | > th | dose dependent | rect. | 16 | 3 |