Os10g0444700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphate transporter 6.
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Os10g0444700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphate transporter 6.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.6 | 0.478 | 12 | 0.668 | 0.666 | -0.638 | 0.061 | 0.279 | -0.0394 | 18.9 | 41.09 | 4602 | -- | -- |
| 103.24 | 0.473 | 12 | 0.717 | 0.665 | -0.635 | 0.0497 | -- | -0.0334 | 18.9 | 42.28 | 4603 | -- | -- |
| 103.22 | 0.473 | 12 | 0.656 | 0.685 | -0.67 | -- | 0.239 | -0.0306 | 18.9 | 42.26 | 4604 | -- | -- |
| 103.2 | 0.473 | 12 | 0.744 | 0.661 | -0.653 | -- | -- | -0.0179 | 18.9 | 42.4 | 4605 | -- | -- |
| 121.94 | 0.514 | 12 | 0.696 | -- | -0.693 | -- | 0.247 | -0.0729 | -- | 41.42 | 5053 | -- | -- |
| 114.73 | 0.502 | 11.9 | 0.691 | 0.677 | -- | 0.0306 | -- | 0.0715 | 18.7 | -- | -- | -- | -- |
| 114.74 | 0.502 | 11.9 | 0.69 | 0.677 | -- | -- | -- | 0.0716 | 18.7 | -- | -- | -- | -- |
| 121.56 | 0.513 | 12 | 0.728 | -- | -0.781 | -- | -- | -0.045 | -- | 43.95 | 5002 | -- | -- |
| 116.82 | 0.503 | 12 | -- | 0.676 | -0.575 | -- | -- | -0.0786 | 19.2 | 41.23 | 4606 | -- | -- |
| 138.67 | 0.55 | 11.9 | 0.674 | -- | -- | -- | -- | 0.0581 | -- | -- | -- | -- | -- |
| 127.29 | 0.528 | 12 | -- | 0.669 | -- | -- | -- | -0.00527 | 18.7 | -- | -- | -- | -- |
| 134.83 | 0.541 | 12 | -- | -- | -0.53 | -- | -- | -0.208 | -- | 40.02 | 2201 | -- | -- |
| 150.67 | 0.573 | 11.9 | -- | -- | -- | -- | -- | -0.0168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.28 | humidity | 50 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 3 | 98.41 | humidity | 80 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 4 | 98.52 | humidity | 80 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 8 | 98.67 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 9 | 98.68 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 10 | 98.69 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 14 | 98.83 | humidity | 70 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 15 | 98.85 | humidity | 70 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 16 | 98.85 | humidity | 70 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 24 | 98.98 | humidity | 80 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 27 | 99.07 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 30 | 99.11 | humidity | 80 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 31 | 99.11 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 36 | 99.17 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 45 | 99.18 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 46 | 99.18 | humidity | 80 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 54 | 99.24 | humidity | 70 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 66 | 99.26 | humidity | 80 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 75 | 99.32 | humidity | 70 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 119 | 99.44 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 140 | 99.48 | humidity | 50 | 14400 | > th | dose dependent | rect. | 1 | 16 |
| 147 | 99.50 | humidity | 50 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 150 | 99.51 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 153 | 99.51 | humidity | 50 | 14400 | > th | dose dependent | rect. | 14 | 22 |
| 154 | 99.51 | humidity | 50 | 14400 | > th | dose dependent | rect. | 19 | 22 |
| 155 | 99.52 | humidity | 50 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 160 | 99.54 | humidity | 70 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 169 | 99.57 | humidity | 70 | 14400 | > th | dose independent | sin | 15 | NA |
| 175 | 99.58 | humidity | 50 | 14400 | > th | dose dependent | sin | 4 | NA |
| 180 | 99.59 | humidity | 90 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 185 | 99.59 | humidity | 50 | 14400 | > th | dose dependent | rect. | 1 | 20 |
| 193 | 99.60 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 201 | 99.60 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 19 |
| 202 | 99.60 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 20 |
| 211 | 99.61 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 215 | 99.61 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 287 | 99.65 | humidity | 80 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 298 | 99.66 | humidity | 50 | 14400 | > th | dose dependent | no | NA | NA |
| 313 | 99.67 | humidity | 50 | 14400 | > th | dose dependent | rect. | 10 | 23 |
| 446 | 99.79 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 468 | 99.80 | humidity | 50 | 14400 | > th | dose dependent | rect. | 19 | 17 |
| 493 | 99.82 | humidity | 90 | 14400 | < th | dose dependent | rect. | 5 | 20 |
| 513 | 99.83 | humidity | 90 | 14400 | < th | dose dependent | rect. | 19 | 22 |
| 556 | 99.87 | humidity | 70 | 14400 | < th | dose independent | sin | 15 | NA |
| 586 | 99.88 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 588 | 99.88 | humidity | 50 | 14400 | > th | dose dependent | rect. | 14 | 7 |
| 697 | 99.93 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 716 | 99.94 | humidity | 90 | 14400 | < th | dose dependent | no | NA | NA |
| 776 | 99.97 | humidity | 90 | 14400 | < th | dose dependent | sin | 17 | NA |
| 796 | 99.98 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 804 | 99.98 | humidity | 50 | 14400 | > th | dose dependent | rect. | 10 | 12 |
| 816 | 99.98 | humidity | 90 | 14400 | < th | dose dependent | rect. | 22 | 23 |
| 835 | 100.00 | humidity | 50 | 14400 | > th | dose dependent | rect. | 10 | 7 |
| 905 | 100.03 | humidity | 90 | 14400 | < th | dose dependent | rect. | 10 | 15 |
| 945 | 100.05 | wind | 7 | 4320 | > th | dose independent | rect. | 14 | 1 |