Os10g0441900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Resistance protein candidate (Fragment).
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Os10g0441900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Resistance protein candidate (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320.04 | 0.841 | 5.44 | 3.45 | 0.944 | 0.818 | 2.45 | -3.73 | 0.4 | 7.43 | 80.23 | 617 | -- | -- |
| 340.58 | 0.86 | 5.41 | 3.17 | 1.01 | 0.909 | 0.345 | -- | 0.404 | 6.98 | 85.99 | 693 | -- | -- |
| 330.41 | 0.847 | 5.44 | 3.29 | 0.927 | 0.89 | -- | -2.1 | 0.376 | 7.74 | 84.93 | 445 | -- | -- |
| 340.15 | 0.859 | 5.41 | 3.12 | 0.99 | 0.854 | -- | -- | 0.387 | 8.15 | 87.43 | 373 | -- | -- |
| 353.88 | 0.876 | 5.44 | 3.39 | -- | 1.64 | -- | -2.38 | 0.442 | -- | 73.91 | 604 | -- | -- |
| 353.08 | 0.881 | 5.44 | 3.23 | 1.36 | -- | 0.603 | -- | 0.258 | 7.48 | -- | -- | -- | -- |
| 354.08 | 0.881 | 5.44 | 3.24 | 1.36 | -- | -- | -- | 0.257 | 7.47 | -- | -- | -- | -- |
| 365.76 | 0.891 | 5.44 | 3.21 | -- | 1.62 | -- | -- | 0.41 | -- | 72.96 | 613 | -- | -- |
| 592.02 | 1.13 | 5.48 | -- | 0.74 | 1.38 | -- | -- | 0.144 | 8.66 | 86 | 381 | -- | -- |
| 453.38 | 0.995 | 5.47 | 3.26 | -- | -- | -- | -- | 0.279 | -- | -- | -- | -- | -- |
| 631.06 | 1.18 | 5.52 | -- | 1.39 | -- | -- | -- | -0.104 | 7.31 | -- | -- | -- | -- |
| 612.29 | 1.15 | 5.48 | -- | -- | 1.98 | -- | -- | 0.229 | -- | 84.95 | 490 | -- | -- |
| 734.22 | 1.26 | 5.55 | -- | -- | -- | -- | -- | -0.0832 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 309.52 | humidity | 70 | 1440 | > th | dose dependent | rect. | 23 | 15 |
| 9 | 311.54 | humidity | 70 | 90 | > th | dose dependent | rect. | 4 | 21 |
| 17 | 312.83 | humidity | 50 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 22 | 313.43 | humidity | 90 | 720 | < th | dose independent | rect. | 22 | 21 |
| 35 | 314.64 | humidity | 70 | 1440 | > th | dose dependent | sin | 5 | NA |
| 54 | 315.40 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 64 | 315.78 | humidity | 90 | 720 | < th | dose independent | rect. | 23 | 6 |
| 82 | 316.33 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 17 |
| 86 | 316.38 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 92 | 316.52 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 123 | 317.31 | humidity | 80 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 125 | 317.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 22 |
| 139 | 317.62 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 11 |
| 141 | 317.63 | humidity | 80 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 146 | 317.74 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 159 | 318.02 | humidity | 90 | 720 | < th | dose independent | rect. | 15 | 21 |
| 166 | 318.09 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 186 | 318.31 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 197 | 318.45 | humidity | 90 | 1440 | < th | dose independent | rect. | 23 | 15 |
| 199 | 318.47 | humidity | 80 | 90 | > th | dose independent | rect. | 4 | 21 |
| 202 | 318.51 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 203 | 318.51 | wind | 9 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 210 | 318.61 | humidity | 80 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 221 | 318.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 228 | 318.92 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 241 | 319.13 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 17 |
| 248 | 319.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 19 |
| 253 | 319.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 12 |
| 277 | 319.44 | humidity | 90 | 270 | < th | dose independent | rect. | 23 | 10 |
| 280 | 319.49 | wind | 1 | 43200 | < th | dose independent | sin | 9 | NA |
| 298 | 319.59 | humidity | 90 | 720 | > th | dose independent | rect. | 9 | 21 |
| 300 | 319.61 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 316 | 319.73 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 13 |
| 344 | 319.88 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 363 | 320.07 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 422 | 320.57 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 479 | 320.89 | humidity | 90 | 720 | < th | dose independent | sin | 9 | NA |
| 482 | 320.90 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 539 | 321.25 | humidity | 90 | 720 | < th | dose independent | rect. | 7 | 23 |
| 548 | 321.34 | humidity | 80 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 567 | 321.43 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 585 | 321.54 | humidity | 80 | 720 | > th | dose dependent | no | NA | NA |
| 601 | 321.65 | wind | 1 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 650 | 321.83 | wind | 1 | 43200 | > th | dose independent | sin | 10 | NA |
| 675 | 321.93 | humidity | 80 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 700 | 322.02 | humidity | 90 | 720 | < th | dose independent | no | NA | NA |
| 702 | 322.04 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 720 | 322.04 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 784 | 322.30 | humidity | 90 | 720 | < th | dose independent | rect. | 1 | 1 |
| 811 | 322.42 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 817 | 322.44 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 861 | 322.66 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 863 | 322.66 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 899 | 322.77 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 901 | 322.77 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 9 |
| 907 | 322.80 | humidity | 80 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 908 | 322.81 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 8 |
| 924 | 322.87 | humidity | 90 | 1440 | < th | dose independent | sin | 7 | NA |
| 963 | 322.99 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 967 | 322.99 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 974 | 323.01 | radiation | 1 | 1440 | < th | dose dependent | sin | 2 | NA |
| 984 | 323.04 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 22 |