Os10g0440000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os10g0440000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 410.85 | 0.952 | 8.87 | 5.22 | 3.72 | -2.61 | 1.57 | -0.0657 | 1.78 | 17.9 | 20.1 | 216 | 17.2 | 16.2 |
| 409.77 | 0.943 | 8.87 | 5.2 | 3.76 | -2.55 | 1.63 | -- | 1.79 | 17.8 | 20.2 | 207 | 17.2 | 16.3 |
| 416.23 | 0.95 | 8.87 | 5.17 | 3.71 | -2.61 | -- | -0.133 | 1.77 | 17.9 | 20.2 | 214 | 17.1 | 16.3 |
| 415.95 | 0.95 | 8.87 | 5.19 | 3.77 | -2.56 | -- | -- | 1.79 | 17.9 | 20.3 | 208 | 17.2 | 16.3 |
| 604 | 1.14 | 8.86 | 5.75 | -- | -4.52 | -- | -0.101 | 1.91 | -- | 19.1 | 240 | 19.6 | 13.8 |
| 670.18 | 1.21 | 8.98 | 4.69 | 5.47 | -- | 2.29 | -- | 1.35 | 17 | -- | -- | -- | -- |
| 683.51 | 1.22 | 8.98 | 4.7 | 5.49 | -- | -- | -- | 1.36 | 17 | -- | -- | -- | -- |
| 597.4 | 1.14 | 8.79 | 5.7 | -- | -4.6 | -- | -- | 1.78 | -- | 19.13 | 235 | 19.6 | 13.9 |
| 1096.67 | 1.54 | 8.96 | -- | 3.77 | -2.01 | -- | -- | 1.15 | 17.4 | 20.6 | 158 | 17.8 | 16.5 |
| 2268.73 | 2.23 | 8.92 | 4.5 | -- | -- | -- | -- | 1.22 | -- | -- | -- | -- | -- |
| 1265.58 | 1.66 | 9.09 | -- | 5.41 | -- | -- | -- | 0.841 | 17 | -- | -- | -- | -- |
| 1314.53 | 1.69 | 9.01 | -- | -- | -4.32 | -- | -- | 0.729 | -- | 13.34 | 236 | 19.5 | 14.1 |
| 2802.84 | 2.47 | 9.03 | -- | -- | -- | -- | -- | 0.725 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 421.29 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 16 |
| 12 | 442.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 15 | 449.56 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 14 |
| 22 | 453.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 16 |
| 27 | 456.61 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 18 |
| 37 | 461.40 | temperature | 30 | 10 | < th | dose dependent | sin | 9 | NA |
| 48 | 467.50 | temperature | 10 | 10 | > th | dose dependent | sin | 9 | NA |
| 57 | 470.66 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 86 | 481.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 14 |
| 105 | 484.92 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 14 |
| 116 | 486.53 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 22 |
| 118 | 486.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 9 |
| 119 | 486.70 | temperature | 20 | 90 | > th | dose independent | sin | 8 | NA |
| 127 | 487.90 | temperature | 20 | 90 | < th | dose independent | sin | 9 | NA |
| 211 | 496.08 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 18 |
| 225 | 497.54 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 16 |
| 232 | 498.00 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 16 |
| 248 | 498.91 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 14 |
| 268 | 500.26 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 23 |
| 293 | 501.41 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 21 |
| 306 | 501.95 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 14 |
| 318 | 502.49 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 12 |
| 342 | 503.04 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 10 |
| 360 | 503.56 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 9 |
| 406 | 505.01 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 12 |
| 419 | 505.36 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 444 | 506.19 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 22 |
| 542 | 508.74 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 23 |
| 550 | 508.96 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 23 |
| 560 | 509.16 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 7 |
| 563 | 509.21 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 572 | 509.41 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 20 |
| 643 | 510.62 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 8 |
| 687 | 511.38 | temperature | 20 | 30 | < th | dose independent | rect. | 1 | 23 |
| 689 | 511.44 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 710 | 511.82 | temperature | 20 | 30 | < th | dose independent | rect. | 23 | 23 |
| 739 | 512.31 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 744 | 512.40 | temperature | 20 | 30 | < th | dose independent | rect. | 3 | 23 |
| 747 | 512.44 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 18 |
| 758 | 512.57 | temperature | 20 | 30 | < th | dose independent | rect. | 5 | 23 |
| 762 | 512.66 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 778 | 512.92 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 809 | 513.53 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 837 | 513.97 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 18 |
| 843 | 514.05 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 901 | 514.96 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 16 |