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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0439700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0186) R2 : 0.0067
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0688 (0.0392) R2dN8 : 0.00866 R2N8 : 0.0067
σ : 0.351
deviance : 56.54
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.28 0.346 2.95 0.196 0.0889 0.147 -0.0498 -0.82 0.0997 17.5 1015 821 -- --
54.35 0.343 2.96 0.201 0.0953 0.537 -0.0353 -- 0.0984 17.5 1016 768 -- --
54.28 0.343 2.96 0.2 0.0876 0.146 -- -0.867 0.0988 17.8 1014 894 -- --
54.34 0.343 2.96 0.202 0.0897 0.53 -- -- 0.101 17.5 1016 711 -- --
54.69 0.344 2.95 0.195 -- 0.138 -- -0.89 0.0972 -- 1014 886 -- --
55.45 0.349 2.96 0.162 0.0892 -- -0.0972 -- 0.0891 17 -- -- -- --
55.46 0.349 2.96 0.161 0.09 -- -- -- 0.0886 17.5 -- -- -- --
54.75 0.345 2.96 0.2 -- 0.54 -- -- 0.0978 -- 1016 716 -- --
55.39 0.347 2.96 -- 0.0863 0.424 -- -- 0.0764 17.7 1016 758 -- --
55.88 0.349 2.96 0.158 -- -- -- -- 0.0864 -- -- -- -- --
56.15 0.351 2.96 -- 0.0874 -- -- -- 0.0706 17.5 -- -- -- --
55.77 0.348 2.96 -- -- 0.435 -- -- 0.0743 -- 1016 714 -- --
56.54 0.351 2.96 -- -- -- -- -- 0.0688 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.44 wind 1.0 1440 > th dose independent rect. 17 1
2 51.52 wind 1.0 1440 < th dose independent rect. 17 1
3 51.59 wind 1.0 1440 < th dose dependent rect. 17 1
4 52.26 precipitation 0.1 1440 > th dose independent rect. 12 1
6 52.26 precipitation 0.1 1440 > th dose dependent rect. 12 1
10 52.60 radiation 10.0 90 < th dose dependent rect. 11 1
13 52.87 temperature 10.0 1440 > th dose independent rect. 21 1
16 52.87 temperature 30.0 1440 < th dose independent rect. 21 1
20 52.87 humidity 50.0 1440 > th dose independent rect. 21 1
26 52.87 atmosphere 995.0 1440 > th dose independent rect. 21 1
27 52.87 radiation 1.0 1440 < th dose independent rect. 21 1
47 52.87 temperature 10.0 1440 > th dose independent rect. 22 23
50 52.87 radiation 30.0 1440 < th dose dependent rect. 21 1
53 52.91 temperature 25.0 30 > th dose independent rect. 20 1
55 52.91 humidity 90.0 90 > th dose dependent rect. 9 3
58 52.92 humidity 90.0 90 > th dose independent rect. 9 3
61 52.94 humidity 90.0 10 > th dose independent rect. 9 3
65 52.94 temperature 20.0 30 > th dose dependent rect. 20 1
66 52.94 humidity 90.0 10 > th dose dependent rect. 9 3
70 52.95 atmosphere 1005.0 30 > th dose dependent rect. 20 1
76 52.99 atmosphere 1005.0 30 > th dose independent rect. 20 1
79 53.02 humidity 80.0 30 > th dose independent rect. 20 1
86 53.05 wind 3.0 30 > th dose independent rect. 20 1
87 53.05 wind 7.0 30 < th dose independent rect. 20 1
88 53.05 humidity 90.0 30 < th dose independent rect. 20 1
98 53.08 temperature 10.0 30 > th dose independent rect. 20 1
100 53.08 temperature 30.0 30 < th dose independent rect. 20 1
101 53.08 humidity 50.0 30 > th dose independent rect. 20 1
105 53.08 atmosphere 1010.0 30 < th dose independent rect. 20 1
107 53.08 radiation 1.0 30 < th dose independent rect. 20 1
112 53.08 precipitation 0.1 30 < th dose independent rect. 20 1
113 53.08 temperature 10.0 30 > th dose independent rect. 21 23
114 53.08 radiation 1.0 30 < th dose dependent rect. 20 1
119 53.08 precipitation 0.1 30 < th dose dependent rect. 20 1
120 53.08 humidity 90.0 90 > th dose dependent rect. 8 10
122 53.09 wind 1.0 30 > th dose dependent rect. 20 1
123 53.09 humidity 50.0 30 > th dose dependent rect. 20 1
125 53.10 wind 9.0 30 < th dose dependent rect. 20 1
130 53.13 wind 1.0 10 < th dose dependent rect. 1 1
132 53.15 wind 1.0 1440 < th dose independent rect. 17 4
134 53.17 humidity 70.0 10 > th dose dependent rect. 18 1
137 53.19 humidity 90.0 30 < th dose dependent rect. 20 1
139 53.20 radiation 40.0 14400 < th dose dependent rect. 21 1
150 53.26 radiation 20.0 90 < th dose dependent rect. 7 5
153 53.29 humidity 90.0 30 > th dose independent rect. 9 9
154 53.29 atmosphere 1015.0 30 < th dose dependent rect. 20 1
165 53.34 wind 9.0 14400 < th dose independent rect. 5 5
166 53.34 temperature 30.0 30 < th dose dependent rect. 18 1
173 53.40 radiation 10.0 270 < th dose independent rect. 8 2
190 53.46 radiation 10.0 270 < th dose dependent rect. 8 1
191 53.47 humidity 70.0 10 > th dose independent rect. 18 1
193 53.47 temperature 30.0 30 < th dose dependent rect. 20 1
206 53.52 wind 1.0 1440 > th dose independent rect. 17 4
214 53.53 wind 7.0 14400 > th dose dependent rect. 5 5
216 53.54 radiation 10.0 90 < th dose independent rect. 11 1
223 53.54 wind 7.0 14400 > th dose dependent rect. 24 11
226 53.56 temperature 30.0 30 < th dose independent rect. 18 1
232 53.58 wind 9.0 14400 > th dose independent rect. 1 3
233 53.58 wind 9.0 14400 > th dose independent rect. 7 3
249 53.60 wind 9.0 14400 > th dose dependent rect. 21 14
250 53.61 wind 7.0 14400 > th dose independent rect. 2 1
253 53.61 wind 7.0 14400 > th dose dependent rect. 2 1
254 53.61 wind 9.0 14400 > th dose dependent rect. 1 3
266 53.64 wind 7.0 14400 < th dose independent rect. 7 1
281 53.66 atmosphere 1005.0 30 > th dose dependent rect. 18 1
291 53.68 wind 9.0 1440 < th dose independent rect. 21 1
299 53.69 wind 1.0 14400 > th dose independent rect. 17 1
328 53.73 wind 1.0 1440 > th dose independent rect. 19 2
331 53.74 wind 1.0 10 < th dose independent rect. 1 1
332 53.74 wind 7.0 14400 > th dose independent rect. 24 10
340 53.76 wind 7.0 43200 > th dose independent rect. 4 2
341 53.76 wind 7.0 43200 < th dose independent rect. 4 2
346 53.76 radiation 30.0 10 < th dose independent rect. 7 6
354 53.77 wind 7.0 14400 > th dose independent rect. 24 6
356 53.77 wind 7.0 14400 < th dose independent rect. 24 10
358 53.77 wind 9.0 14400 > th dose independent rect. 21 14
359 53.77 humidity 90.0 10 > th dose dependent rect. 9 1
382 53.78 wind 7.0 14400 < th dose independent rect. 24 6
396 53.78 wind 5.0 14400 > th dose dependent rect. 24 6
400 53.79 wind 7.0 14400 < th dose independent rect. 24 8
427 53.81 humidity 50.0 30 > th dose dependent rect. 7 5
442 53.82 temperature 25.0 90 < th dose dependent rect. 1 2
452 53.83 humidity 70.0 90 > th dose independent rect. 9 3
462 53.83 wind 1.0 14400 < th dose dependent rect. 17 3
465 53.83 atmosphere 1000.0 10 > th dose dependent rect. 7 17
481 53.84 wind 9.0 30 < th dose independent rect. 21 23
483 53.84 wind 5.0 14400 > th dose dependent rect. 4 2
492 53.85 humidity 70.0 30 > th dose independent rect. 7 5
497 53.85 wind 9.0 14400 < th dose independent rect. 21 13
510 53.86 wind 7.0 14400 > th dose independent rect. 7 1
523 53.86 wind 1.0 43200 < th dose dependent rect. 8 1
561 53.88 radiation 1.0 4320 < th dose dependent rect. 19 6
585 53.90 wind 7.0 14400 < th dose independent rect. 2 1
594 53.90 wind 9.0 14400 > th dose independent rect. 21 10
600 53.90 humidity 60.0 30 > th dose dependent rect. 9 3
609 53.90 radiation 10.0 720 < th dose dependent rect. 16 10
613 53.90 temperature 30.0 30 < th dose dependent rect. 20 16
620 53.91 atmosphere 1005.0 30 > th dose independent rect. 7 5
635 53.91 radiation 30.0 720 < th dose dependent rect. 16 10
644 53.92 wind 1.0 14400 < th dose independent rect. 15 5
664 53.93 wind 1.0 1440 < th dose independent rect. 19 2
675 53.93 atmosphere 1015.0 720 < th dose independent rect. 24 17
685 53.93 radiation 30.0 270 < th dose dependent rect. 17 19
722 53.95 temperature 15.0 720 > th dose independent rect. 5 7
725 53.95 radiation 1.0 720 < th dose independent rect. 17 9
744 53.96 atmosphere 1015.0 720 < th dose independent rect. 8 23
753 53.96 temperature 30.0 30 < th dose dependent rect. 1 11
756 53.97 humidity 90.0 14400 < th dose independent rect. 11 1
770 53.97 wind 1.0 14400 < th dose dependent rect. 14 9
776 53.98 wind 1.0 14400 > th dose independent rect. 15 5
809 53.99 atmosphere 1015.0 720 < th dose independent rect. 19 12
810 53.99 humidity 90.0 720 > th dose dependent rect. 24 1
819 53.99 temperature 30.0 90 < th dose dependent rect. 7 5
828 54.00 wind 1.0 14400 > th dose independent rect. 15 3
841 54.00 temperature 15.0 720 > th dose independent rect. 24 17
842 54.00 atmosphere 1005.0 10 > th dose independent rect. 7 17
857 54.00 atmosphere 1000.0 10 > th dose dependent rect. 3 21
872 54.01 humidity 70.0 30 > th dose independent rect. 18 18
873 54.01 wind 7.0 14400 > th dose dependent rect. 7 2
875 54.01 humidity 70.0 270 > th dose dependent rect. 7 3
888 54.02 humidity 90.0 14400 > th dose independent rect. 11 1
895 54.02 precipitation 0.1 14400 < th dose independent rect. 5 5
901 54.02 radiation 20.0 270 < th dose independent rect. 17 19
909 54.02 precipitation 0.1 14400 < th dose dependent rect. 5 5
915 54.02 temperature 30.0 270 < th dose dependent rect. 22 14
920 54.03 wind 1.0 43200 < th dose independent rect. 8 1
936 54.03 temperature 15.0 720 > th dose independent rect. 2 14
941 54.03 precipitation 0.1 14400 > th dose dependent rect. 5 6
959 54.04 precipitation 0.1 14400 > th dose independent rect. 5 5
965 54.04 wind 1.0 14400 > th dose independent rect. 15 8
981 54.04 atmosphere 1000.0 30 > th dose dependent rect. 7 5
1000 54.05 atmosphere 1015.0 720 < th dose independent rect. 23 4