FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0438600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Family II lipase EXL3.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.87 (0.0301) R2 : 0.00752
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.118 (0.0634) R2dN8 : 0.00971 R2N8 : 0.00752
σ : 0.567
deviance : 147.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
139.76 0.555 2.9 -0.123 0.145 -0.517 -0.427 2.16 0.103 15.7 1.117 16 -- --
144.13 0.559 2.87 -0.0262 0.123 -0.363 -0.161 -- 0.128 15.6 1.2 16 -- --
140.28 0.552 2.9 -0.116 0.134 -0.544 -- 2.22 0.0998 15.8 1.094 16 -- --
144.21 0.559 2.87 -0.0291 0.122 -0.365 -- -- 0.127 15.5 1.199 16 -- --
141.11 0.553 2.9 -0.109 -- -0.462 -- 2.15 0.0967 -- 1.074 16 -- --
147.43 0.569 2.87 0.0255 0.0199 -- -0.209 -- 0.122 14.3 -- -- -- --
147.56 0.569 2.87 0.0195 0.0277 -- -- -- 0.12 11 -- -- -- --
144.9 0.561 2.87 -0.0247 -- -0.299 -- -- 0.123 -- 1.17 16 -- --
144.23 0.559 2.87 -- 0.121 -0.361 -- -- 0.13 15.5 1.193 16 -- --
147.61 0.568 2.87 0.0189 -- -- -- -- 0.12 -- -- -- -- --
147.57 0.568 2.87 -- 0.0276 -- -- -- 0.118 10.9 -- -- -- --
144.92 0.561 2.87 -- -- -0.296 -- -- 0.125 -- 1.195 16 -- --
147.62 0.567 2.87 -- -- -- -- -- 0.118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 126.17 atmosphere 1005.0 10 > th dose dependent rect. 2 1
5 126.35 atmosphere 1000.0 30 > th dose independent rect. 2 1
8 126.42 temperature 25.0 30 < th dose independent rect. 2 1
9 126.42 temperature 30.0 30 < th dose dependent rect. 2 1
10 126.46 wind 5.0 30 < th dose independent rect. 2 1
13 126.48 temperature 10.0 30 > th dose independent rect. 2 1
16 126.48 humidity 50.0 30 > th dose independent rect. 2 1
21 126.48 atmosphere 1010.0 30 < th dose independent rect. 2 1
23 126.48 radiation 1.0 30 < th dose independent rect. 2 1
28 126.48 precipitation 0.1 30 < th dose independent rect. 2 1
29 126.48 temperature 10.0 30 > th dose independent rect. 3 23
30 126.48 radiation 1.0 30 < th dose dependent rect. 2 1
35 126.48 precipitation 0.1 30 < th dose dependent rect. 2 1
37 126.50 wind 9.0 30 < th dose dependent rect. 2 1
40 126.56 temperature 10.0 30 > th dose dependent rect. 2 1
42 126.57 humidity 50.0 30 > th dose dependent rect. 2 1
45 126.65 wind 9.0 1440 < th dose independent rect. 3 1
46 126.65 temperature 10.0 1440 > th dose independent rect. 3 1
49 126.65 temperature 30.0 1440 < th dose independent rect. 3 1
53 126.65 humidity 50.0 1440 > th dose independent rect. 3 1
62 126.65 atmosphere 995.0 1440 > th dose independent rect. 3 1
63 126.65 radiation 1.0 1440 < th dose independent rect. 3 1
83 126.65 temperature 10.0 1440 > th dose independent rect. 4 23
86 126.65 radiation 1.0 1440 < th dose dependent rect. 3 1
105 126.75 atmosphere 1015.0 30 < th dose dependent rect. 2 1
107 126.78 wind 1.0 30 > th dose independent rect. 2 1
116 126.89 atmosphere 995.0 30 > th dose independent rect. 3 23
171 128.01 wind 9.0 30 < th dose independent rect. 3 23
172 128.19 precipitation 0.1 30 < th dose independent rect. 3 23
173 128.19 precipitation 0.1 30 < th dose dependent rect. 3 23
190 132.50 humidity 50.0 30 > th dose independent rect. 3 23
195 132.80 temperature 30.0 30 < th dose independent rect. 3 23
228 135.26 atmosphere 1015.0 30 < th dose independent rect. 3 23
258 135.79 radiation 40.0 10 < th dose independent rect. 3 23
267 136.34 temperature 30.0 90 > th dose dependent rect. 12 1
275 136.81 wind 9.0 30 < th dose dependent rect. 3 23
309 137.37 humidity 90.0 90 < th dose independent rect. 2 1
362 138.54 wind 1.0 30 > th dose independent rect. 3 23
365 138.68 radiation 40.0 10 > th dose independent rect. 14 1
408 138.84 radiation 40.0 10 > th dose independent sin 13 NA
413 138.92 wind 1.0 10 > th dose independent sin 15 NA
442 139.38 radiation 40.0 10 < th dose independent sin 13 NA
444 139.39 temperature 25.0 270 > th dose independent rect. 23 4
475 139.68 humidity 90.0 10 > th dose independent rect. 24 3
487 139.82 wind 1.0 10 < th dose independent rect. 6 21
490 139.85 temperature 25.0 270 > th dose dependent rect. 23 4
492 139.89 temperature 30.0 10 > th dose dependent rect. 14 1
500 139.91 radiation 40.0 10 < th dose dependent rect. 3 23
520 140.13 atmosphere 995.0 720 > th dose independent rect. 15 8
528 140.19 temperature 10.0 720 > th dose independent rect. 15 8
529 140.19 temperature 10.0 720 > th dose independent rect. 23 16
531 140.21 temperature 30.0 10 > th dose dependent rect. 12 3
532 140.22 atmosphere 995.0 720 > th dose independent rect. 23 16
544 140.26 atmosphere 995.0 720 > th dose independent rect. 11 16
549 140.27 temperature 10.0 720 > th dose independent rect. 3 8
550 140.27 atmosphere 995.0 720 > th dose independent rect. 3 8
551 140.27 temperature 10.0 720 > th dose independent rect. 11 16
562 140.30 humidity 50.0 720 > th dose independent rect. 3 8
592 140.33 temperature 10.0 30 > th dose dependent rect. 3 23
594 140.36 wind 1.0 10 > th dose independent rect. 13 23
601 140.41 wind 9.0 720 < th dose independent rect. 3 8
621 140.55 temperature 30.0 90 > th dose independent rect. 12 1
622 140.55 precipitation 0.1 720 < th dose independent rect. 15 8
623 140.55 precipitation 0.1 720 < th dose dependent rect. 15 8
626 140.59 wind 1.0 30 > th dose dependent rect. 2 1
664 140.73 humidity 60.0 90 < th dose independent rect. 12 1
767 140.94 wind 1.0 10 > th dose independent no NA NA
793 141.02 wind 1.0 10 < th dose independent rect. 2 7
794 141.02 temperature 30.0 720 < th dose independent rect. 3 8
806 141.12 precipitation 0.1 720 < th dose independent rect. 11 16
808 141.12 precipitation 0.1 720 < th dose dependent rect. 11 16
809 141.14 wind 1.0 10 > th dose independent rect. 18 17
811 141.16 radiation 10.0 30 < th dose independent rect. 3 23
816 141.18 wind 3.0 10 < th dose dependent rect. 22 5
903 141.51 humidity 50.0 90 > th dose independent rect. 3 8
904 141.52 wind 7.0 90 < th dose independent rect. 3 8
907 141.54 precipitation 0.1 90 < th dose independent rect. 3 8
908 141.54 precipitation 0.1 90 < th dose dependent rect. 3 8
912 141.56 temperature 10.0 90 > th dose independent rect. 3 8
913 141.56 atmosphere 995.0 90 > th dose independent rect. 3 8
914 141.56 atmosphere 1015.0 90 < th dose independent rect. 3 8
915 141.56 temperature 10.0 90 > th dose independent rect. 11 16
946 141.70 radiation 10.0 90 < th dose dependent rect. 3 22
952 141.74 wind 1.0 10 < th dose independent sin 15 NA
978 141.75 precipitation 0.1 90 < th dose independent rect. 11 16
985 141.75 precipitation 0.1 90 < th dose dependent rect. 11 16
987 141.76 atmosphere 995.0 90 > th dose independent rect. 11 16