Os10g0437700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os10g0437700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.11 | 0.326 | 3.12 | -0.107 | 0.231 | 0.079 | -0.545 | 0.994 | 0.319 | 6.02 | 58.95 | 4455 | -- | -- |
| 49.31 | 0.327 | 3.12 | -0.0341 | 0.23 | 0.171 | -0.667 | -- | 0.323 | 5.87 | 68 | 4224 | -- | -- |
| 48.74 | 0.325 | 3.12 | -0.114 | 0.231 | 0.0596 | -- | 0.981 | 0.31 | 6.28 | 58.98 | 4992 | -- | -- |
| 49.98 | 0.329 | 3.13 | -0.0564 | 0.224 | 0.191 | -- | -- | 0.319 | 6.42 | 69 | 4217 | -- | -- |
| 51.51 | 0.334 | 3.12 | -0.102 | -- | 0.031 | -- | 1.03 | 0.319 | -- | 58.89 | 4990 | -- | -- |
| 49.91 | 0.331 | 3.13 | -0.0564 | 0.231 | -- | -0.565 | -- | 0.317 | 5.86 | -- | -- | -- | -- |
| 50.65 | 0.333 | 3.12 | -0.0597 | 0.23 | -- | -- | -- | 0.32 | 6.33 | -- | -- | -- | -- |
| 52.47 | 0.337 | 3.12 | -0.121 | -- | 0.236 | -- | -- | 0.342 | -- | 50.01 | 6818 | -- | -- |
| 50.07 | 0.33 | 3.12 | -- | 0.224 | 0.185 | -- | -- | 0.32 | 6.48 | 68.99 | 4217 | -- | -- |
| 53.39 | 0.341 | 3.13 | -0.0536 | -- | -- | -- | -- | 0.325 | -- | -- | -- | -- | -- |
| 50.74 | 0.333 | 3.12 | -- | 0.229 | -- | -- | -- | 0.326 | 6.34 | -- | -- | -- | -- |
| 52.69 | 0.338 | 3.12 | -- | -- | 0.209 | -- | -- | 0.325 | -- | 69 | 4224 | -- | -- |
| 53.47 | 0.341 | 3.13 | -- | -- | -- | -- | -- | 0.331 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.90 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 15 | 41.12 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 16 | 41.17 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 31 | 41.44 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 32 | 41.46 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 34 | 41.49 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 36 | 41.55 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 37 | 41.55 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 64 | 42.72 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 78 | 42.74 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 114 | 43.16 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 148 | 43.28 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 150 | 43.29 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 155 | 43.34 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 159 | 43.35 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 161 | 43.36 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 184 | 43.55 | temperature | 25.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 257 | 44.00 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 258 | 44.00 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 262 | 44.04 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 264 | 44.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 268 | 44.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 272 | 44.04 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 277 | 44.04 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 278 | 44.04 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 279 | 44.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 283 | 44.08 | wind | 3.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 284 | 44.08 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 286 | 44.08 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 287 | 44.08 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 7 |
| 291 | 44.09 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 293 | 44.09 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 294 | 44.09 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 297 | 44.09 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 298 | 44.09 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 299 | 44.09 | radiation | 20.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 302 | 44.09 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 1 |
| 304 | 44.09 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 305 | 44.09 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 307 | 44.09 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 308 | 44.09 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 310 | 44.10 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 315 | 44.12 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 316 | 44.12 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 317 | 44.13 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 325 | 44.14 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 327 | 44.15 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 328 | 44.15 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 329 | 44.16 | radiation | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 348 | 44.22 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 408 | 44.33 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 429 | 44.35 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 430 | 44.35 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 455 | 44.44 | temperature | 30.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 461 | 44.45 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 463 | 44.46 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 473 | 44.49 | temperature | 30.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 474 | 44.49 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 505 | 44.52 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 7 |
| 508 | 44.53 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 24 | 9 |
| 585 | 44.64 | wind | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 725 | 44.93 | temperature | 25.0 | 10 | > th | dose independent | rect. | 22 | 11 |
| 759 | 44.95 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 5 |
| 785 | 45.01 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 7 |
| 787 | 45.01 | temperature | 25.0 | 10 | > th | dose independent | rect. | 18 | 15 |
| 820 | 45.07 | temperature | 30.0 | 14400 | > th | dose dependent | no | NA | NA |
| 822 | 45.07 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 11 |