Os10g0437100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter I family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0437100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Amino acid/polyamine transporter I family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.03 | 0.24 | 9.94 | -0.912 | 0.216 | -0.00374 | 0.145 | 2.09 | -0.321 | 11.9 | 10 | 4338 | -- | -- |
| 29.97 | 0.255 | 9.95 | -0.755 | 0.222 | 0.118 | 0.15 | -- | -0.272 | 12.3 | 23.04 | 12356 | -- | -- |
| 26.07 | 0.238 | 9.94 | -0.913 | 0.217 | -0.00104 | -- | 2.09 | -0.321 | 11.9 | 10 | 4263 | -- | -- |
| 28.6 | 0.249 | 9.96 | -0.762 | 0.251 | 0.223 | -- | -- | -0.278 | 12.2 | 2.366 | 12943 | -- | -- |
| 28.86 | 0.25 | 9.95 | -0.955 | -- | 0.109 | -- | 2.07 | -0.312 | -- | 9.227 | 4237 | -- | -- |
| 30.36 | 0.258 | 9.96 | -0.749 | 0.227 | -- | 0.139 | -- | -0.299 | 12.1 | -- | -- | -- | -- |
| 30.45 | 0.258 | 9.96 | -0.744 | 0.227 | -- | -- | -- | -0.299 | 12.1 | -- | -- | -- | -- |
| 29.73 | 0.255 | 9.96 | -0.753 | -- | -0.192 | -- | -- | -0.307 | -- | 2.366 | 12943 | -- | -- |
| 28.14 | 0.247 | 9.85 | -- | 0.23 | 0.544 | -- | -- | 0.00785 | 12 | 0.9608 | 47489 | -- | -- |
| 33.69 | 0.271 | 9.96 | -0.751 | -- | -- | -- | -- | -0.302 | -- | -- | -- | -- | -- |
| 45.02 | 0.314 | 9.94 | -- | 0.237 | -- | -- | -- | -0.216 | 12.3 | -- | -- | -- | -- |
| 28.73 | 0.25 | 9.9 | -- | -- | 0.7 | -- | -- | -0.0422 | -- | 0.0009023 | 44361 | -- | -- |
| 48.55 | 0.325 | 9.94 | -- | -- | -- | -- | -- | -0.219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.68 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 2 | 24.69 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 16 | 24.73 | radiation | 10 | 4320 | < th | dose dependent | rect. | 17 | 12 |
| 23 | 24.76 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 14 |
| 24 | 24.77 | humidity | 50 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 27 | 24.78 | radiation | 40 | 4320 | < th | dose dependent | rect. | 17 | 3 |
| 28 | 24.79 | radiation | 10 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 32 | 24.79 | radiation | 10 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 37 | 24.80 | radiation | 30 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 43 | 24.81 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 3 |
| 47 | 24.81 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 80 | 24.83 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 109 | 24.85 | humidity | 50 | 43200 | > th | dose independent | rect. | 23 | 11 |
| 116 | 24.87 | humidity | 50 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 122 | 24.88 | humidity | 50 | 43200 | > th | dose independent | sin | 10 | NA |
| 125 | 24.88 | humidity | 50 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 128 | 24.89 | humidity | 50 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 137 | 24.91 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 15 |
| 153 | 24.93 | humidity | 50 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 190 | 24.97 | humidity | 50 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 193 | 24.98 | humidity | 50 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 221 | 25.01 | humidity | 60 | 43200 | < th | dose dependent | rect. | 22 | 11 |
| 240 | 25.03 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 248 | 25.05 | humidity | 50 | 43200 | < th | dose independent | sin | 10 | NA |
| 259 | 25.05 | radiation | 1 | 4320 | > th | dose dependent | rect. | 15 | 16 |
| 262 | 25.06 | humidity | 50 | 43200 | < th | dose dependent | sin | 10 | NA |
| 265 | 25.06 | humidity | 50 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 268 | 25.07 | humidity | 50 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 314 | 25.12 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 21 |
| 358 | 25.18 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 21 |
| 462 | 25.29 | radiation | 10 | 4320 | < th | dose dependent | sin | 13 | NA |
| 472 | 25.31 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 473 | 25.31 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 482 | 25.32 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 546 | 25.35 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 595 | 25.38 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 674 | 25.44 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 682 | 25.45 | radiation | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 684 | 25.45 | humidity | 90 | 43200 | > th | dose dependent | sin | 7 | NA |
| 693 | 25.46 | humidity | 90 | 43200 | > th | dose independent | rect. | 24 | 9 |
| 736 | 25.49 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 743 | 25.49 | radiation | 1 | 4320 | > th | dose dependent | sin | 13 | NA |
| 773 | 25.51 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 814 | 25.52 | humidity | 70 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 859 | 25.54 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 939 | 25.58 | humidity | 90 | 43200 | > th | dose independent | sin | 8 | NA |
| 947 | 25.58 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 992 | 25.60 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |