Os10g0432200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 68 kDa protein HP68.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0432200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to 68 kDa protein HP68.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.63 | 0.43 | 10.5 | -0.499 | 0.563 | -1.68 | 0.255 | -1.72 | 0.218 | 20.1 | 21.5 | 1677 | -- | -- |
| 85.7 | 0.431 | 10.5 | -0.607 | 0.568 | -1.17 | 0.232 | -- | 0.202 | 20 | 22.14 | 1683 | -- | -- |
| 83.82 | 0.426 | 10.5 | -0.509 | 0.565 | -1.69 | -- | -1.72 | 0.217 | 20 | 21.5 | 1673 | -- | -- |
| 85.84 | 0.432 | 10.5 | -0.638 | 0.564 | -1.21 | -- | -- | 0.192 | 20.1 | 22.1 | 1696 | -- | -- |
| 97.29 | 0.459 | 10.5 | -0.522 | -- | -1.11 | -- | -0.453 | 0.139 | -- | 28.3 | 561 | -- | -- |
| 99.25 | 0.467 | 10.5 | -0.289 | 0.563 | -- | 0.379 | -- | 0.359 | 20.1 | -- | -- | -- | -- |
| 99.66 | 0.468 | 10.5 | -0.299 | 0.564 | -- | -- | -- | 0.36 | 20 | -- | -- | -- | -- |
| 97.5 | 0.46 | 10.5 | -0.581 | -- | -1.06 | -- | -- | 0.13 | -- | 28.88 | 583 | -- | -- |
| 94.69 | 0.453 | 10.5 | -- | 0.568 | -0.776 | -- | -- | 0.292 | 20 | 22.7 | 1630 | -- | -- |
| 117.07 | 0.506 | 10.4 | -0.305 | -- | -- | -- | -- | 0.352 | -- | -- | -- | -- | -- |
| 102.03 | 0.472 | 10.4 | -- | 0.566 | -- | -- | -- | 0.393 | 20 | -- | -- | -- | -- |
| 105.69 | 0.479 | 10.5 | -- | -- | -0.856 | -- | -- | 0.237 | -- | 29.2 | 556 | -- | -- |
| 119.52 | 0.51 | 10.4 | -- | -- | -- | -- | -- | 0.386 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 10 |
| 4 | 83.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 32 | 83.99 | temperature | 20 | 1440 | < th | dose independent | sin | 1 | NA |
| 33 | 84.01 | temperature | 20 | 1440 | > th | dose independent | sin | 1 | NA |
| 41 | 84.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 45 | 84.25 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 52 | 84.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 15 |
| 184 | 85.17 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 15 |
| 188 | 85.18 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 13 |
| 191 | 85.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 256 | 85.39 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 269 | 85.43 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 21 |
| 280 | 85.45 | wind | 3 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 293 | 85.49 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 313 | 85.53 | wind | 3 | 14400 | < th | dose dependent | sin | 13 | NA |
| 324 | 85.56 | temperature | 20 | 1440 | < th | dose dependent | sin | 0 | NA |
| 327 | 85.56 | wind | 3 | 14400 | < th | dose dependent | rect. | 14 | 17 |
| 331 | 85.57 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 350 | 85.61 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 363 | 85.63 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 366 | 85.63 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 374 | 85.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 377 | 85.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 381 | 85.66 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 389 | 85.67 | temperature | 20 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 409 | 85.70 | temperature | 20 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 426 | 85.73 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 439 | 85.76 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 445 | 85.76 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 451 | 85.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 454 | 85.77 | humidity | 70 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 466 | 85.79 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 19 |
| 471 | 85.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 506 | 85.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 511 | 85.84 | temperature | 20 | 1440 | < th | dose dependent | rect. | 22 | 20 |
| 525 | 85.86 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 538 | 85.87 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 540 | 85.87 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 16 |
| 545 | 85.87 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 546 | 85.87 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 578 | 85.89 | temperature | 20 | 1440 | < th | dose dependent | rect. | 10 | 22 |
| 592 | 85.90 | temperature | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 597 | 85.90 | temperature | 20 | 1440 | < th | dose dependent | rect. | 14 | 21 |
| 638 | 85.92 | temperature | 20 | 1440 | < th | dose dependent | rect. | 14 | 19 |
| 753 | 86.01 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 784 | 86.04 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 17 |
| 837 | 86.09 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 20 |
| 839 | 86.09 | wind | 1 | 43200 | < th | dose independent | rect. | 3 | 21 |
| 848 | 86.10 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 869 | 86.11 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 22 |
| 876 | 86.12 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 22 |
| 884 | 86.12 | humidity | 70 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 905 | 86.14 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 908 | 86.14 | wind | 1 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 913 | 86.15 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 8 |
| 944 | 86.16 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 945 | 86.16 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 23 |
| 969 | 86.18 | wind | 1 | 43200 | < th | dose independent | no | NA | NA |
| 980 | 86.18 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 987 | 86.19 | wind | 3 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 991 | 86.19 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 7 |