Os10g0431100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0431100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.52 | 0.362 | 6.77 | 1.5 | 0.385 | -1.89 | -0.0631 | 1.16 | 0.379 | 21.9 | 8.883 | 647 | -- | -- |
| 60.54 | 0.362 | 6.79 | 1.33 | 0.373 | -1.82 | 0.0109 | -- | 0.322 | 22.6 | 10.67 | 713 | -- | -- |
| 59.51 | 0.359 | 6.77 | 1.5 | 0.38 | -1.91 | -- | 1.18 | 0.38 | 21.3 | 9.183 | 599 | -- | -- |
| 60.47 | 0.362 | 6.79 | 1.3 | 0.387 | -1.88 | -- | -- | 0.327 | 21.9 | 8.535 | 650 | -- | -- |
| 64.77 | 0.375 | 6.77 | 1.44 | -- | -1.66 | -- | 1.56 | 0.337 | -- | 10.37 | 358 | -- | -- |
| 103.07 | 0.476 | 6.85 | 0.843 | 0.228 | -- | 0.0161 | -- | 0.0399 | 4.16 | -- | -- | -- | -- |
| 103.07 | 0.475 | 6.85 | 0.843 | 0.228 | -- | -- | -- | 0.0398 | 4.16 | -- | -- | -- | -- |
| 65.7 | 0.378 | 6.78 | 1.35 | -- | -1.55 | -- | -- | 0.332 | -- | 10.3 | 1808 | -- | -- |
| 99.59 | 0.465 | 6.84 | -- | 0.22 | -1.32 | -- | -- | 0.108 | 21.4 | 13.16 | 488 | -- | -- |
| 105.88 | 0.481 | 6.85 | 0.852 | -- | -- | -- | -- | 0.0459 | -- | -- | -- | -- | -- |
| 121.81 | 0.516 | 6.87 | -- | 0.244 | -- | -- | -- | -0.0541 | 4.1 | -- | -- | -- | -- |
| 101.13 | 0.468 | 6.84 | -- | -- | -1.21 | -- | -- | 0.091 | -- | 14.52 | 352 | -- | -- |
| 125.05 | 0.522 | 6.87 | -- | -- | -- | -- | -- | -0.0487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 5 | 58.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 21 |
| 27 | 59.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 46 | 59.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 52 | 59.67 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 54 | 59.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 59 | 59.71 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 60 | 59.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 64 | 59.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 70 | 59.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 79 | 59.92 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 99 | 60.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 103 | 60.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 104 | 60.17 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 108 | 60.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 129 | 60.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 137 | 60.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 165 | 60.65 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 174 | 60.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 205 | 60.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 307 | 61.71 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 336 | 62.02 | radiation | 1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 374 | 62.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 379 | 62.22 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 390 | 62.24 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 391 | 62.25 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 395 | 62.27 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 403 | 62.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 414 | 62.34 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 415 | 62.34 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 454 | 62.47 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 576 | 62.70 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 2 |
| 592 | 62.72 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 593 | 62.72 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 622 | 62.76 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 633 | 62.78 | temperature | 10 | 1440 | > th | dose dependent | sin | 6 | NA |
| 638 | 62.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 649 | 62.80 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 4 |
| 684 | 62.83 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 4 |
| 738 | 62.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 828 | 62.93 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 830 | 62.93 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 2 |
| 976 | 63.03 | radiation | 40 | 4320 | < th | dose dependent | rect. | 3 | 3 |