Os10g0427900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0427900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.32 | 0.522 | 9.27 | -2.09 | 0.331 | -1.15 | 1.62 | -1.69 | -0.71 | 2.65 | 26.2 | 7 | -- | -- |
| 126.6 | 0.528 | 9.3 | -2.38 | 0.315 | -1.04 | 0.986 | -- | -0.77 | 3.19 | 26.2 | 7 | -- | -- |
| 129.05 | 0.533 | 9.29 | -2.31 | 0.328 | -1.04 | -- | -0.493 | -0.751 | 3.98 | 26.1 | 2 | -- | -- |
| 129.48 | 0.533 | 9.3 | -2.39 | 0.32 | -1.01 | -- | -- | -0.768 | 4.03 | 26.1 | 2 | -- | -- |
| 133.54 | 0.541 | 9.29 | -2.27 | -- | -0.856 | -- | -0.398 | -0.705 | -- | 25.6 | 2 | -- | -- |
| 143.14 | 0.561 | 9.25 | -2.12 | 0.0184 | -- | -0.901 | -- | -0.542 | 13.3 | -- | -- | -- | -- |
| 144.71 | 0.563 | 9.25 | -2.15 | 0.182 | -- | -- | -- | -0.55 | 7.51 | -- | -- | -- | -- |
| 133.83 | 0.541 | 9.29 | -2.34 | -- | -0.833 | -- | -- | -0.719 | -- | 25.6 | 2 | -- | -- |
| 204.48 | 0.666 | 9.11 | -- | 0.173 | 1.27 | -- | -- | 0.0687 | 7.19 | 129.8 | 47520 | -- | -- |
| 146.48 | 0.566 | 9.26 | -2.15 | -- | -- | -- | -- | -0.547 | -- | -- | -- | -- | -- |
| 266.75 | 0.764 | 9.2 | -- | 0.168 | -- | -- | -- | -0.311 | 8.38 | -- | -- | -- | -- |
| 193.11 | 0.647 | 9.14 | -- | -- | 1.48 | -- | -- | -0.0195 | -- | 19.52 | 47520 | -- | -- |
| 268.32 | 0.765 | 9.2 | -- | -- | -- | -- | -- | -0.309 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.99 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 2 |
| 4 | 117.91 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 7 |
| 6 | 118.11 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 4 |
| 7 | 118.11 | temperature | 30 | 90 | < th | dose dependent | rect. | 12 | 19 |
| 10 | 118.20 | temperature | 25 | 720 | < th | dose independent | rect. | 13 | 9 |
| 22 | 118.52 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 26 | 118.70 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 12 |
| 31 | 118.78 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 71 | 119.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 10 |
| 99 | 120.02 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 7 |
| 116 | 120.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 135 | 120.25 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 164 | 120.60 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 172 | 120.66 | temperature | 25 | 720 | > th | dose independent | sin | 17 | NA |
| 190 | 120.84 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 198 | 120.91 | temperature | 25 | 720 | < th | dose independent | sin | 19 | NA |
| 214 | 121.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 257 | 121.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 7 |
| 260 | 121.41 | temperature | 20 | 90 | > th | dose dependent | sin | 11 | NA |
| 350 | 122.02 | temperature | 30 | 30 | < th | dose dependent | sin | 12 | NA |
| 371 | 122.18 | temperature | 10 | 30 | > th | dose dependent | sin | 11 | NA |
| 431 | 122.53 | temperature | 30 | 270 | < th | dose dependent | sin | 15 | NA |
| 467 | 122.72 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 475 | 122.74 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 491 | 122.79 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 493 | 122.80 | temperature | 30 | 720 | < th | dose dependent | sin | 19 | NA |
| 512 | 122.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 20 | 11 |
| 674 | 123.51 | radiation | 20 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 690 | 123.60 | radiation | 20 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 694 | 123.62 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 697 | 123.63 | radiation | 20 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 708 | 123.65 | radiation | 20 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 727 | 123.76 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 19 |
| 778 | 123.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 11 |
| 779 | 124.00 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 790 | 124.03 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 795 | 124.04 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 19 |
| 821 | 124.12 | radiation | 20 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 838 | 124.19 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 17 |
| 854 | 124.26 | humidity | 60 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 904 | 124.37 | radiation | 20 | 1440 | > th | dose independent | rect. | 13 | 4 |
| 928 | 124.39 | radiation | 20 | 1440 | < th | dose independent | sin | 15 | NA |
| 958 | 124.45 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 998 | 124.57 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 17 |