Os10g0427600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MATH domain containing protein.
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Os10g0427600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : MATH domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.63 | 0.256 | 2.61 | 1.84 | 0.000162 | -17.8 | -0.112 | 109 | -0.0053 | 2.26 | 996.3 | 998 | -- | -- |
| 32.41 | 0.267 | 2.9 | 0.0812 | 0.0419 | 0.372 | 0.0836 | -- | -0.00815 | 6.88 | 998 | 1529 | -- | -- |
| 29.67 | 0.254 | 2.61 | 1.85 | 0.0104 | -17.8 | -- | 109 | -0.00574 | 7.83 | 996.3 | 998 | -- | -- |
| 30.79 | 0.258 | 2.9 | 0.0713 | 0.0327 | 0.658 | -- | -- | -0.00248 | 5.76 | 996.8 | 1045 | -- | -- |
| 29.67 | 0.254 | 2.59 | 1.91 | -- | -18.2 | -- | 112 | -0.00476 | -- | 996.2 | 998 | -- | -- |
| 33.15 | 0.27 | 2.9 | 0.0977 | 0.0371 | -- | 0.0736 | -- | -0.0147 | 7.03 | -- | -- | -- | -- |
| 33.16 | 0.27 | 2.91 | 0.0987 | 0.0389 | -- | -- | -- | -0.015 | 6.11 | -- | -- | -- | -- |
| 30.84 | 0.259 | 2.9 | 0.0731 | -- | 0.668 | -- | -- | -0.00345 | -- | 996.8 | 1045 | -- | -- |
| 30.92 | 0.259 | 2.9 | -- | 0.0313 | 0.684 | -- | -- | -0.00817 | 7.19 | 996.7 | 1039 | -- | -- |
| 33.23 | 0.269 | 2.91 | 0.0998 | -- | -- | -- | -- | -0.0142 | -- | -- | -- | -- | -- |
| 33.41 | 0.27 | 2.91 | -- | 0.0404 | -- | -- | -- | -0.026 | 5.98 | -- | -- | -- | -- |
| 30.98 | 0.259 | 2.91 | -- | -- | 0.682 | -- | -- | -0.0115 | -- | 996.8 | 1045 | -- | -- |
| 33.5 | 0.27 | 2.91 | -- | -- | -- | -- | -- | -0.0253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.03 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 5 | 1 |
| 9 | 21.03 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 24 | 21.17 | temperature | 25 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 31 | 22.57 | temperature | 25 | 30 | > th | dose independent | rect. | 5 | 1 |
| 42 | 25.79 | wind | 1 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 74 | 26.67 | temperature | 25 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 95 | 27.09 | temperature | 25 | 270 | > th | dose independent | rect. | 2 | 4 |
| 103 | 27.40 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 2 | 5 |
| 121 | 27.68 | temperature | 25 | 270 | > th | dose independent | rect. | 2 | 1 |
| 182 | 29.13 | atmosphere | 995 | 720 | < th | dose independent | rect. | 18 | 1 |
| 206 | 29.13 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 287 | 29.64 | temperature | 25 | 30 | > th | dose independent | rect. | 2 | 4 |
| 354 | 30.16 | wind | 1 | 10 | < th | dose dependent | rect. | 5 | 11 |
| 395 | 30.35 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 3 | 13 |
| 396 | 30.36 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 10 | 12 |
| 397 | 30.36 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 407 | 30.38 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 8 | 14 |
| 429 | 30.45 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 441 | 30.47 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 449 | 30.49 | atmosphere | 1000 | 270 | < th | dose dependent | sin | 8 | NA |
| 461 | 30.51 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 466 | 30.52 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 474 | 30.54 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 14 | 15 |
| 476 | 30.54 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 481 | 30.55 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 490 | 30.56 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 20 | 22 |
| 496 | 30.57 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 499 | 30.58 | atmosphere | 995 | 1440 | > th | dose independent | sin | 13 | NA |
| 501 | 30.58 | atmosphere | 995 | 1440 | > th | dose independent | sin | 0 | NA |
| 512 | 30.59 | atmosphere | 995 | 1440 | > th | dose independent | sin | 7 | NA |
| 513 | 30.59 | atmosphere | 995 | 1440 | > th | dose independent | sin | 10 | NA |
| 519 | 30.59 | atmosphere | 995 | 1440 | > th | dose independent | sin | 21 | NA |
| 524 | 30.59 | atmosphere | 995 | 1440 | > th | dose independent | no | NA | NA |
| 525 | 30.59 | atmosphere | 995 | 1440 | < th | dose independent | sin | 7 | NA |
| 526 | 30.59 | atmosphere | 995 | 1440 | < th | dose independent | sin | 17 | NA |
| 540 | 30.59 | atmosphere | 995 | 1440 | < th | dose independent | no | NA | NA |
| 541 | 30.59 | atmosphere | 995 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 821 | 30.59 | atmosphere | 995 | 1440 | < th | dose dependent | sin | 7 | NA |
| 822 | 30.59 | atmosphere | 995 | 1440 | < th | dose dependent | sin | 16 | NA |
| 837 | 30.59 | atmosphere | 995 | 1440 | < th | dose dependent | no | NA | NA |
| 838 | 30.59 | atmosphere | 995 | 1440 | < th | dose dependent | rect. | 14 | 1 |