Os10g0427300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0427300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.5 | 0.303 | 6.06 | 0.878 | 0.373 | -0.683 | -0.496 | -0.88 | 0.072 | 8.47 | 26.49 | 36 | -- | -- |
| 42.67 | 0.307 | 6.07 | 0.732 | 0.363 | -0.649 | -0.368 | -- | 0.0376 | 8.29 | 26.8 | 42 | -- | -- |
| 42.24 | 0.305 | 6.06 | 0.84 | 0.362 | -0.673 | -- | -0.709 | 0.0668 | 8.41 | 26.59 | 36 | -- | -- |
| 43.08 | 0.308 | 6.07 | 0.725 | 0.363 | -0.636 | -- | -- | 0.041 | 8.48 | 26.8 | 22 | -- | -- |
| 49.44 | 0.329 | 6.07 | 0.828 | -- | -0.74 | -- | -0.713 | 0.0564 | -- | 26.65 | 4 | -- | -- |
| 48.9 | 0.328 | 6.04 | 0.883 | 0.428 | -- | -0.209 | -- | 0.181 | 10 | -- | -- | -- | -- |
| 49.07 | 0.328 | 6.04 | 0.875 | 0.429 | -- | -- | -- | 0.181 | 10.1 | -- | -- | -- | -- |
| 50.33 | 0.332 | 6.09 | 0.711 | -- | -0.709 | -- | -- | 0.0293 | -- | 26.8 | 8 | -- | -- |
| 55.45 | 0.347 | 6.11 | -- | 0.411 | -0.932 | -- | -- | -0.0932 | 7.3 | 26.98 | 57 | -- | -- |
| 60.17 | 0.362 | 6.05 | 0.87 | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
| 69.26 | 0.389 | 6.06 | -- | 0.425 | -- | -- | -- | 0.0836 | 9.96 | -- | -- | -- | -- |
| 62.75 | 0.369 | 6.11 | -- | -- | -0.913 | -- | -- | -0.0888 | -- | 26.8 | 2 | -- | -- |
| 80.11 | 0.418 | 6.07 | -- | -- | -- | -- | -- | 0.084 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.14 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 3 | 40.39 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 5 | 40.52 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 8 | 40.59 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 17 | 40.89 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 19 | 41.03 | wind | 3 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 21 | 41.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 22 | 41.12 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 11 |
| 24 | 41.15 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 23 |
| 25 | 41.15 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 18 |
| 26 | 41.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 46 | 41.31 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 62 | 41.39 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 72 | 41.45 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 85 | 41.51 | temperature | 25 | 720 | < th | dose dependent | sin | 15 | NA |
| 88 | 41.52 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 90 | 41.54 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 12 |
| 105 | 41.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 108 | 41.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 109 | 41.60 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 136 | 41.70 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 18 |
| 137 | 41.70 | temperature | 20 | 270 | < th | dose independent | rect. | 24 | 22 |
| 141 | 41.71 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 20 |
| 157 | 41.76 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 185 | 41.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 11 |
| 194 | 41.87 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 240 | 41.98 | temperature | 15 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 244 | 41.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 249 | 42.00 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 257 | 42.01 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 22 |
| 264 | 42.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 273 | 42.03 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 278 | 42.04 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 280 | 42.04 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 282 | 42.05 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 284 | 42.05 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 295 | 42.05 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 296 | 42.05 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 297 | 42.05 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 298 | 42.05 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 332 | 42.08 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 454 | 42.16 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 12 |
| 458 | 42.16 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 483 | 42.19 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 490 | 42.19 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 23 |
| 492 | 42.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 506 | 42.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 4 |
| 508 | 42.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 520 | 42.21 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 8 |
| 523 | 42.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 12 |
| 524 | 42.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 540 | 42.22 | temperature | 20 | 270 | < th | dose independent | sin | 9 | NA |
| 553 | 42.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 610 | 42.27 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 13 |
| 664 | 42.30 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 678 | 42.30 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 702 | 42.32 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 11 |
| 724 | 42.33 | temperature | 20 | 90 | < th | dose independent | sin | 5 | NA |
| 773 | 42.35 | temperature | 20 | 10 | < th | dose independent | sin | 5 | NA |
| 780 | 42.35 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 23 |
| 796 | 42.36 | temperature | 20 | 90 | > th | dose independent | sin | 4 | NA |
| 808 | 42.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 862 | 42.39 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 881 | 42.39 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 885 | 42.40 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 914 | 42.41 | temperature | 20 | 270 | < th | dose independent | rect. | 19 | 13 |
| 921 | 42.41 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 922 | 42.41 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 942 | 42.42 | temperature | 20 | 270 | < th | dose independent | rect. | 18 | 18 |
| 961 | 42.43 | temperature | 20 | 270 | < th | dose independent | rect. | 9 | 23 |
| 997 | 42.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 14 |