Os10g0426600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : TRAF-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0426600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : TRAF-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 275.35 | 0.78 | 3.03 | 0.257 | 0.309 | -1.06 | -0.347 | -2.88 | -0.0853 | 18 | 29 | 3912 | -- | -- |
| 281.12 | 0.781 | 3.13 | -0.332 | 0.321 | -0.891 | -0.428 | -- | -0.234 | 17.8 | 35 | 2552 | -- | -- |
| 275.55 | 0.773 | 3.03 | 0.265 | 0.329 | -1.07 | -- | -2.92 | -0.0819 | 18.5 | 28.7 | 4176 | -- | -- |
| 281.55 | 0.781 | 3.13 | -0.334 | 0.318 | -0.889 | -- | -- | -0.236 | 18.1 | 35.7 | 2582 | -- | -- |
| 280.29 | 0.78 | 3.03 | 0.261 | -- | -1.05 | -- | -2.88 | -0.0889 | -- | 29.3 | 3714 | -- | -- |
| 297.17 | 0.808 | 3.09 | 0.0113 | 0.305 | -- | -0.206 | -- | -0.0525 | 19 | -- | -- | -- | -- |
| 297.25 | 0.807 | 3.09 | 0.0144 | 0.304 | -- | -- | -- | -0.0534 | 19.3 | -- | -- | -- | -- |
| 285.17 | 0.786 | 3.13 | -0.321 | -- | -0.977 | -- | -- | -0.243 | -- | 41.72 | 2009 | -- | -- |
| 283.98 | 0.785 | 3.12 | -- | 0.312 | -0.747 | -- | -- | -0.175 | 18.2 | 43.21 | 2549 | -- | -- |
| 302.16 | 0.812 | 3.08 | 0.00912 | -- | -- | -- | -- | -0.0586 | -- | -- | -- | -- | -- |
| 297.26 | 0.807 | 3.09 | -- | 0.304 | -- | -- | -- | -0.055 | 19.3 | -- | -- | -- | -- |
| 287.5 | 0.79 | 3.11 | -- | -- | -0.846 | -- | -- | -0.188 | -- | 43.87 | 1974 | -- | -- |
| 302.16 | 0.811 | 3.08 | -- | -- | -- | -- | -- | -0.0596 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 270.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 2 | 270.86 | temperature | 25 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 13 | 273.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 11 |
| 15 | 273.30 | temperature | 25 | 90 | > th | dose dependent | rect. | 14 | 3 |
| 18 | 273.43 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 23 | 273.72 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 29 | 274.03 | temperature | 25 | 10 | > th | dose independent | rect. | 14 | 5 |
| 31 | 274.07 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 14 | 3 |
| 34 | 274.10 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 75 | 274.94 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 20 |
| 83 | 275.01 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 13 |
| 95 | 275.08 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 98 | 275.10 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 13 |
| 110 | 275.15 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 20 |
| 118 | 275.17 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 129 | 275.22 | temperature | 30 | 4320 | < th | dose dependent | sin | 4 | NA |
| 132 | 275.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 21 |
| 149 | 275.29 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 14 |
| 150 | 275.29 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 158 | 275.30 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 190 | 275.34 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 12 | 4 |
| 219 | 275.40 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 222 | 275.41 | temperature | 10 | 4320 | > th | dose dependent | sin | 5 | NA |
| 252 | 275.45 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 281 | 275.50 | temperature | 25 | 4320 | < th | dose independent | sin | 4 | NA |
| 282 | 275.50 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 6 |
| 329 | 275.55 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 13 |
| 358 | 275.58 | temperature | 30 | 4320 | < th | dose dependent | rect. | 9 | 22 |
| 370 | 275.59 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 22 |
| 383 | 275.61 | temperature | 25 | 4320 | < th | dose independent | rect. | 2 | 13 |
| 414 | 275.63 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 448 | 275.65 | temperature | 30 | 4320 | < th | dose dependent | rect. | 11 | 23 |
| 509 | 275.71 | temperature | 30 | 4320 | < th | dose dependent | rect. | 14 | 23 |
| 582 | 275.77 | temperature | 25 | 4320 | > th | dose independent | rect. | 2 | 15 |
| 628 | 275.81 | temperature | 25 | 4320 | > th | dose independent | sin | 4 | NA |
| 631 | 275.81 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 23 |
| 648 | 275.82 | temperature | 25 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 663 | 275.83 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 20 |
| 664 | 275.83 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 20 |
| 684 | 275.84 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 18 |
| 702 | 275.85 | temperature | 25 | 4320 | < th | dose independent | rect. | 2 | 23 |
| 703 | 275.85 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 23 |
| 719 | 275.86 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 22 |
| 743 | 275.87 | temperature | 25 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 750 | 275.88 | temperature | 25 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 771 | 275.88 | temperature | 10 | 4320 | > th | dose dependent | rect. | 9 | 22 |
| 775 | 275.89 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 804 | 275.90 | temperature | 25 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 880 | 275.94 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 9 |
| 887 | 275.94 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 23 |
| 888 | 275.94 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 899 | 275.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 23 |
| 978 | 275.98 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 22 |
| 996 | 275.99 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |