Os10g0423800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : TRAF-like domain containing protein.
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Os10g0423800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : TRAF-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.08 | 0.587 | 3.97 | 0.95 | 0.0211 | 1.9 | -0.858 | 1.12 | -0.174 | 18.8 | 23.54 | 574 | -- | -- |
| 157.33 | 0.584 | 3.94 | 1.11 | 0.00875 | 1.72 | -1.1 | -- | -0.133 | 19.1 | 23.81 | 578 | -- | -- |
| 157.55 | 0.585 | 3.99 | 0.875 | 0.0609 | 2.03 | -- | 1.79 | -0.202 | 15.8 | 23.37 | 524 | -- | -- |
| 160.31 | 0.59 | 3.95 | 1.14 | 0.0646 | 1.71 | -- | -- | -0.138 | 14 | 23.83 | 562 | -- | -- |
| 157.75 | 0.585 | 3.97 | 0.894 | -- | 1.99 | -- | 1.59 | -0.195 | -- | 23.4 | 550 | -- | -- |
| 198.08 | 0.66 | 4.01 | 0.644 | 0.19 | -- | 0.884 | -- | -0.449 | 8.26 | -- | -- | -- | -- |
| 200.08 | 0.662 | 4.01 | 0.674 | 0.199 | -- | -- | -- | -0.447 | 9.92 | -- | -- | -- | -- |
| 160.52 | 0.59 | 3.94 | 1.12 | -- | 1.71 | -- | -- | -0.141 | -- | 23.84 | 578 | -- | -- |
| 189.31 | 0.641 | 3.99 | -- | 0.0755 | 1.21 | -- | -- | -0.347 | 12.9 | 23.9 | 523 | -- | -- |
| 202.46 | 0.665 | 4.01 | 0.671 | -- | -- | -- | -- | -0.447 | -- | -- | -- | -- | -- |
| 212.03 | 0.681 | 4.03 | -- | 0.197 | -- | -- | -- | -0.522 | 9.67 | -- | -- | -- | -- |
| 189.73 | 0.642 | 3.99 | -- | -- | 1.24 | -- | -- | -0.335 | -- | 23.9 | 540 | -- | -- |
| 214.35 | 0.683 | 4.03 | -- | -- | -- | -- | -- | -0.522 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.04 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 2 | 152.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 7 | 153.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 10 | 154.07 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 13 | 154.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 14 | 154.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 15 | 154.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 17 | 155.11 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 18 | 155.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 19 | 155.16 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 8 |
| 21 | 155.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 22 | 155.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 23 | 155.24 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 27 | 155.57 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 33 | 155.75 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 36 | 155.94 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 42 | 156.09 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 45 | 156.16 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 49 | 156.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 50 | 156.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 71 | 157.28 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 72 | 157.31 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 83 | 157.57 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 14 | 22 |
| 84 | 157.61 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 96 | 157.76 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 97 | 157.77 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 102 | 157.84 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 118 | 157.94 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 127 | 158.01 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 162 | 158.31 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 172 | 158.37 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 175 | 158.39 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 193 | 158.56 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 336 | 159.80 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 349 | 159.95 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 369 | 160.09 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 393 | 160.48 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 533 | 161.41 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 564 | 161.58 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 580 | 161.67 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 607 | 161.87 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 20 |
| 626 | 161.97 | temperature | 10.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 632 | 162.01 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 634 | 162.02 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 658 | 162.14 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 676 | 162.23 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 692 | 162.28 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 6 |
| 695 | 162.29 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 778 | 162.53 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 23 |