Os10g0423000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0423000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.08 | 0.205 | 12.9 | -0.0278 | 0.272 | -0.893 | 0.0888 | -0.0391 | 0.196 | 23.4 | 28.01 | 12 | -- | -- |
| 19.03 | 0.205 | 12.9 | -0.0306 | 0.274 | -0.887 | 0.0666 | -- | 0.198 | 23.3 | 28.03 | 11 | -- | -- |
| 19.05 | 0.205 | 12.9 | -0.0345 | 0.273 | -0.883 | -- | 0.0131 | 0.198 | 23.2 | 28.01 | 12 | -- | -- |
| 19.04 | 0.205 | 12.9 | -0.0319 | 0.272 | -0.884 | -- | -- | 0.199 | 23.2 | 27.97 | 10 | -- | -- |
| 21.06 | 0.214 | 12.9 | -0.0269 | -- | -0.815 | -- | -0.0279 | 0.207 | -- | 26.21 | 243 | -- | -- |
| 30.18 | 0.258 | 12.8 | 0.177 | 0.199 | -- | -0.15 | -- | 0.387 | 18.4 | -- | -- | -- | -- |
| 30.23 | 0.257 | 12.8 | 0.179 | 0.198 | -- | -- | -- | 0.386 | 18.5 | -- | -- | -- | -- |
| 21.05 | 0.214 | 12.9 | -0.0298 | -- | -0.812 | -- | -- | 0.208 | -- | 26.24 | 239 | -- | -- |
| 19.07 | 0.204 | 12.9 | -- | 0.269 | -0.872 | -- | -- | 0.205 | 23.2 | 27.97 | 10 | -- | -- |
| 32.27 | 0.265 | 12.8 | 0.174 | -- | -- | -- | -- | 0.382 | -- | -- | -- | -- | -- |
| 31.08 | 0.261 | 12.8 | -- | 0.196 | -- | -- | -- | 0.366 | 18.6 | -- | -- | -- | -- |
| 21.07 | 0.214 | 12.9 | -- | -- | -0.801 | -- | -- | 0.214 | -- | 26.25 | 243 | -- | -- |
| 33.07 | 0.268 | 12.8 | -- | -- | -- | -- | -- | 0.363 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 2 | 19.17 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 3 | 19.18 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 6 | 19.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 7 | 19.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 8 | 19.29 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 9 | 19.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 10 | 19.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 15 | 19.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 20 | 19.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 25 | 19.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 27 | 19.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 28 | 19.72 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 70 | 20.17 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 86 | 20.23 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 90 | 20.25 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 126 | 20.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 135 | 20.54 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 151 | 20.58 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 180 | 20.63 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 183 | 20.64 | temperature | 25 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 193 | 20.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 198 | 20.66 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 215 | 20.68 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 238 | 20.69 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 16 |
| 241 | 20.69 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 243 | 20.70 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 252 | 20.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 279 | 20.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 14 |
| 450 | 20.81 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |
| 496 | 20.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 4 |
| 508 | 20.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 18 |
| 511 | 20.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 20 |
| 514 | 20.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 553 | 20.85 | temperature | 10 | 1440 | > th | dose dependent | sin | 8 | NA |
| 590 | 20.86 | temperature | 25 | 1440 | < th | dose dependent | sin | 5 | NA |
| 592 | 20.86 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 632 | 20.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 642 | 20.87 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 643 | 20.87 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 699 | 20.88 | temperature | 15 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 700 | 20.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 711 | 20.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 863 | 20.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 913 | 20.96 | temperature | 15 | 90 | > th | dose dependent | rect. | 4 | 23 |