Os10g0421500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0421500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.33 | 0.337 | 8.53 | -1.2 | 0.449 | -1.91 | -0.249 | -0.111 | -0.0988 | 3.6 | 25.94 | 101 | -- | -- |
| 51.34 | 0.334 | 8.53 | -1.21 | 0.457 | -1.9 | -0.26 | -- | -0.0996 | 3.58 | 26.04 | 102 | -- | -- |
| 51.43 | 0.334 | 8.52 | -1.14 | 0.453 | -1.91 | -- | -0.306 | -0.0786 | 3.8 | 26.01 | 123 | -- | -- |
| 51.5 | 0.334 | 8.53 | -1.22 | 0.461 | -1.91 | -- | -- | -0.102 | 3.9 | 26.08 | 124 | -- | -- |
| 58.29 | 0.356 | 8.5 | -1.11 | -- | -1.77 | -- | -0.342 | 0.00408 | -- | 24.55 | 168 | -- | -- |
| 103.19 | 0.476 | 8.44 | -0.752 | 0.118 | -- | 0.347 | -- | 0.307 | 9.65 | -- | -- | -- | -- |
| 103.55 | 0.477 | 8.43 | -0.741 | 0.127 | -- | -- | -- | 0.306 | 8.37 | -- | -- | -- | -- |
| 58.47 | 0.356 | 8.51 | -1.16 | -- | -1.73 | -- | -- | 5.65e-05 | -- | 24.55 | 166 | -- | -- |
| 85.21 | 0.432 | 8.48 | -- | 0.335 | -1.41 | -- | -- | 0.121 | 3.12 | 26.08 | 124 | -- | -- |
| 104.44 | 0.478 | 8.44 | -0.74 | -- | -- | -- | -- | 0.308 | -- | -- | -- | -- | -- |
| 118.01 | 0.508 | 8.42 | -- | 0.124 | -- | -- | -- | 0.389 | 8.81 | -- | -- | -- | -- |
| 89.65 | 0.442 | 8.46 | -- | -- | -1.26 | -- | -- | 0.192 | -- | 24.7 | 35 | -- | -- |
| 118.89 | 0.509 | 8.42 | -- | -- | -- | -- | -- | 0.39 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.05 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 52.28 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 3 | 52.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 16 |
| 4 | 52.59 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 10 | 52.77 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 11 | 52.82 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 20 | 52.97 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 25 | 53.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 26 | 53.07 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 27 | 53.08 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 33 | 53.11 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 34 | 53.12 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 41 | 53.18 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 43 | 53.19 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 48 | 53.22 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 82 | 53.51 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 97 | 53.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 194 | 54.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 209 | 54.76 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 212 | 54.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 232 | 54.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 248 | 54.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 270 | 55.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 678 | 58.34 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 754 | 58.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 766 | 58.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 767 | 58.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 924 | 59.43 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |