Os10g0420400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sulfate transporter 3.1 (AST12) (AtST1).
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Os10g0420400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sulfate transporter 3.1 (AST12) (AtST1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 207.21 | 0.676 | 3.3 | -0.287 | 0.0602 | 0.394 | 0.841 | -0.749 | 0.0348 | 5.46 | 23.03 | 34 | -- | -- |
| 208.94 | 0.673 | 3.3 | -0.316 | 0.0761 | 0.42 | 1.02 | -- | 0.0568 | 4.66 | 22.99 | 36 | -- | -- |
| 208.91 | 0.673 | 3.3 | -0.277 | 0.066 | 0.399 | -- | -0.831 | 0.0338 | 5.44 | 23.03 | 36 | -- | -- |
| 211.74 | 0.678 | 3.3 | -0.304 | 0.0671 | 0.387 | -- | -- | 0.0327 | 5.72 | 23.03 | 36 | -- | -- |
| 209.14 | 0.674 | 3.3 | -0.279 | -- | 0.388 | -- | -0.836 | 0.0356 | -- | 23.02 | 36 | -- | -- |
| 215.32 | 0.688 | 3.29 | -0.258 | 0.23 | -- | -0.71 | -- | 0.0563 | 13.2 | -- | -- | -- | -- |
| 216.78 | 0.689 | 3.29 | -0.285 | 0.249 | -- | -- | -- | 0.0504 | 11.5 | -- | -- | -- | -- |
| 211.94 | 0.678 | 3.3 | -0.3 | -- | 0.385 | -- | -- | 0.0352 | -- | 22.93 | 36 | -- | -- |
| 214.18 | 0.682 | 3.29 | -- | 0.0667 | 0.391 | -- | -- | 0.0674 | 5.66 | 23.03 | 36 | -- | -- |
| 220.68 | 0.694 | 3.3 | -0.292 | -- | -- | -- | -- | 0.0477 | -- | -- | -- | -- | -- |
| 218.93 | 0.692 | 3.29 | -- | 0.252 | -- | -- | -- | 0.0822 | 11.6 | -- | -- | -- | -- |
| 214.36 | 0.682 | 3.29 | -- | -- | 0.382 | -- | -- | 0.0694 | -- | 23.02 | 36 | -- | -- |
| 222.93 | 0.697 | 3.29 | -- | -- | -- | -- | -- | 0.0801 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 198.52 | radiation | 20 | 90 | > th | dose independent | rect. | 7 | 1 |
| 16 | 198.78 | radiation | 20 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 157 | 200.95 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 217 | 200.95 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 277 | 201.06 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 6 | 1 |
| 281 | 201.06 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 290 | 201.07 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 319 | 201.19 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 321 | 201.23 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 432 | 202.54 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 6 | 3 |
| 501 | 203.82 | humidity | 80 | 270 | < th | dose independent | rect. | 21 | 16 |
| 516 | 204.28 | humidity | 80 | 270 | < th | dose independent | rect. | 9 | 2 |
| 517 | 204.29 | humidity | 80 | 270 | > th | dose independent | rect. | 3 | 8 |
| 518 | 204.30 | humidity | 80 | 270 | > th | dose independent | sin | 6 | NA |
| 588 | 204.65 | humidity | 80 | 270 | < th | dose independent | rect. | 8 | 5 |
| 592 | 204.72 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 4 | 4 |
| 596 | 204.84 | humidity | 80 | 270 | < th | dose independent | rect. | 2 | 11 |
| 600 | 204.94 | humidity | 80 | 270 | < th | dose independent | rect. | 4 | 9 |
| 630 | 205.13 | humidity | 80 | 270 | < th | dose independent | sin | 6 | NA |
| 641 | 205.22 | radiation | 20 | 30 | < th | dose independent | sin | 11 | NA |
| 644 | 205.24 | humidity | 70 | 270 | > th | dose dependent | sin | 6 | NA |
| 666 | 205.44 | humidity | 80 | 270 | > th | dose independent | rect. | 3 | 12 |
| 673 | 205.47 | temperature | 15 | 90 | > th | dose independent | rect. | 9 | 6 |
| 678 | 205.50 | humidity | 80 | 270 | > th | dose independent | rect. | 21 | 14 |
| 694 | 205.58 | humidity | 70 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 698 | 205.63 | humidity | 90 | 270 | < th | dose dependent | rect. | 22 | 15 |
| 746 | 205.88 | radiation | 20 | 30 | > th | dose independent | sin | 11 | NA |
| 781 | 206.06 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 786 | 206.10 | humidity | 70 | 270 | > th | dose dependent | rect. | 3 | 12 |
| 797 | 206.16 | humidity | 70 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 875 | 206.50 | humidity | 80 | 270 | > th | dose dependent | rect. | 21 | 19 |
| 881 | 206.53 | humidity | 50 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 895 | 206.57 | humidity | 90 | 270 | < th | dose dependent | sin | 7 | NA |
| 899 | 206.58 | wind | 9 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 901 | 206.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 2 |
| 904 | 206.63 | radiation | 20 | 30 | > th | dose independent | rect. | 9 | 8 |
| 950 | 206.71 | temperature | 15 | 270 | > th | dose independent | rect. | 8 | 19 |
| 973 | 206.77 | radiation | 1 | 30 | > th | dose dependent | rect. | 9 | 22 |
| 989 | 206.78 | temperature | 15 | 90 | > th | dose independent | rect. | 9 | 21 |