Os10g0419300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heat shock transcription factor 31 (Fragment).
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Os10g0419300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Heat shock transcription factor 31 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.58 | 0.414 | 11.3 | -1.98 | 0.706 | 0.0268 | -0.612 | -2.71 | -0.753 | 8.99 | 21.5 | 1862 | -- | -- |
| 87.58 | 0.436 | 11.3 | -1.67 | 0.668 | 0.638 | -0.827 | -- | -0.736 | 9.21 | 20.2 | 19964 | -- | -- |
| 78.45 | 0.413 | 11.3 | -2 | 0.712 | 0.0307 | -- | -2.77 | -0.758 | 9.03 | 21.52 | 1578 | -- | -- |
| 87.04 | 0.435 | 11.3 | -1.88 | 0.695 | 0.758 | -- | -- | -0.767 | 9.08 | 20.2 | 20678 | -- | -- |
| 107.37 | 0.483 | 11.3 | -1.95 | -- | 0.0138 | -- | -2.67 | -0.729 | -- | 21.4 | 1577 | -- | -- |
| 95.12 | 0.457 | 11.2 | -1.15 | 0.702 | -- | -0.456 | -- | -0.522 | 8.97 | -- | -- | -- | -- |
| 95.83 | 0.458 | 11.2 | -1.16 | 0.703 | -- | -- | -- | -0.523 | 8.99 | -- | -- | -- | -- |
| 115.12 | 0.5 | 11.3 | -1.88 | -- | 0.877 | -- | -- | -0.723 | -- | 16.41 | 23171 | -- | -- |
| 111.7 | 0.492 | 11.1 | -- | 0.695 | -0.655 | -- | -- | -0.169 | 8.95 | 21.77 | 47520 | -- | -- |
| 124.2 | 0.521 | 11.2 | -1.17 | -- | -- | -- | -- | -0.518 | -- | -- | -- | -- | -- |
| 131.58 | 0.537 | 11.2 | -- | 0.702 | -- | -- | -- | -0.393 | 9.11 | -- | -- | -- | -- |
| 138.3 | 0.548 | 11.2 | -- | -- | -0.678 | -- | -- | -0.121 | -- | 26.29 | 47520 | -- | -- |
| 160.03 | 0.59 | 11.2 | -- | -- | -- | -- | -- | -0.389 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.54 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 2 | 74.08 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 4 | 74.15 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 6 | 74.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 9 | 74.39 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 13 | 74.54 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 14 | 74.58 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 18 | 74.66 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 19 | 74.66 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 23 | 74.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 43 | 74.98 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 47 | 75.03 | wind | 3.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 49 | 75.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 50 | 75.06 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 16 |
| 56 | 75.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 82 | 75.33 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 91 | 75.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 92 | 75.39 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 98 | 75.44 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 119 | 75.68 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 121 | 75.70 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 123 | 75.72 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 134 | 75.79 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 135 | 75.79 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 5 |
| 144 | 75.86 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 145 | 75.87 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 147 | 75.88 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 169 | 76.03 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 173 | 76.04 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 188 | 76.08 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 198 | 76.17 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 201 | 76.20 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 203 | 76.22 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 213 | 76.26 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 248 | 76.44 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 268 | 76.53 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 273 | 76.55 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 278 | 76.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 12 |
| 288 | 76.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 295 | 76.64 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 302 | 76.66 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 308 | 76.68 | wind | 3.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 310 | 76.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 21 |
| 321 | 76.72 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 8 | 12 |
| 333 | 76.76 | humidity | 80.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 338 | 76.77 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 349 | 76.79 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 368 | 76.85 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 369 | 76.85 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 379 | 76.87 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 388 | 76.87 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 391 | 76.88 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 411 | 76.93 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 19 |
| 414 | 76.94 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 458 | 77.02 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 464 | 77.03 | humidity | 90.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 484 | 77.06 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 22 |
| 486 | 77.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 495 | 77.09 | wind | 3.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 496 | 77.09 | wind | 3.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 497 | 77.09 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 508 | 77.11 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 514 | 77.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 567 | 77.18 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 13 |
| 576 | 77.19 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 595 | 77.21 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 602 | 77.21 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 22 |
| 608 | 77.22 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 652 | 77.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 657 | 77.26 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 15 |
| 659 | 77.26 | wind | 3.0 | 43200 | < th | dose independent | rect. | 18 | 20 |
| 660 | 77.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 726 | 77.32 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 763 | 77.37 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 775 | 77.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 814 | 77.42 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 815 | 77.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 826 | 77.43 | wind | 3.0 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 853 | 77.46 | humidity | 80.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 935 | 77.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 956 | 77.55 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 992 | 77.59 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |