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Os10g0415400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.88 (0.0183) R2 : 0.59
β1 : -1.52 (0.0672) R2dD : 0.477 R2D : 0.414
β2 : 0.592 (0.0469) R2dC : 0.144 R2C : 0.12
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.219 (0.0392) R2dN8 : 0.0379 R2N8 : -0.0194
σ : 0.345
deviance : 54.26
__
_____
C
peak time of C : 4.23
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.39 0.302 8.89 -1.53 0.678 -0.49 0.198 -0.992 -0.214 3.71 69.43 1252 -- --
43.02 0.305 8.86 -1.39 0.683 -0.562 0.0851 -- -0.142 3.66 70.04 1234 -- --
41.5 0.3 8.89 -1.53 0.68 -0.488 -- -0.954 -0.214 3.75 69.87 1251 -- --
43.02 0.305 8.86 -1.39 0.684 -0.559 -- -- -0.144 3.68 70 1234 -- --
49.12 0.326 8.88 -1.49 -- -0.597 -- -0.523 -0.184 -- 74.92 341 -- --
54.25 0.345 8.88 -1.52 0.593 -- -0.0657 -- -0.22 4.24 -- -- -- --
54.26 0.345 8.88 -1.52 0.592 -- -- -- -0.219 4.23 -- -- -- --
50 0.329 8.87 -1.46 -- -0.603 -- -- -0.176 -- 74.52 338 -- --
92.46 0.448 8.82 -- 0.697 -0.776 -- -- 0.0356 3.55 70 1239 -- --
73.21 0.4 8.88 -1.49 -- -- -- -- -0.204 -- -- -- -- --
115.02 0.502 8.84 -- 0.563 -- -- -- -0.0504 4.28 -- -- -- --
103.97 0.475 8.84 -- -- -0.744 -- -- -0.00782 -- 71.39 389 -- --
132.13 0.537 8.84 -- -- -- -- -- -0.0379 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 40.33 temperature 25.0 14400 > th dose independent rect. 11 1
5 40.51 temperature 25.0 14400 < th dose independent rect. 11 1
9 40.60 wind 1.0 43200 < th dose dependent rect. 1 1
22 40.95 humidity 90.0 14400 > th dose dependent rect. 4 19
25 40.98 humidity 90.0 14400 > th dose dependent sin 16 NA
27 40.99 humidity 70.0 14400 < th dose independent rect. 17 2
32 41.03 humidity 90.0 14400 > th dose dependent rect. 9 18
44 41.10 wind 3.0 14400 < th dose independent rect. 3 1
51 41.12 humidity 70.0 14400 < th dose independent rect. 17 15
59 41.16 humidity 90.0 14400 > th dose dependent rect. 12 14
62 41.16 radiation 1.0 1440 < th dose dependent rect. 18 23
63 41.17 wind 3.0 14400 > th dose independent rect. 3 1
76 41.20 humidity 90.0 14400 > th dose independent rect. 9 18
79 41.20 radiation 1.0 1440 < th dose dependent rect. 18 11
85 41.21 humidity 90.0 14400 < th dose independent rect. 9 16
86 41.21 humidity 90.0 14400 > th dose dependent rect. 18 7
93 41.23 humidity 90.0 14400 < th dose independent sin 18 NA
94 41.23 precipitation 0.1 14400 < th dose independent rect. 5 2
97 41.23 humidity 90.0 14400 < th dose independent rect. 8 19
98 41.23 precipitation 0.1 14400 < th dose dependent rect. 5 2
103 41.24 radiation 40.0 43200 < th dose independent rect. 10 1
104 41.24 wind 1.0 14400 > th dose dependent rect. 3 1
167 41.37 humidity 90.0 14400 > th dose independent sin 17 NA
178 41.39 humidity 70.0 14400 < th dose dependent rect. 17 1
191 41.42 humidity 80.0 1440 < th dose dependent rect. 17 1
199 41.43 humidity 90.0 14400 < th dose independent rect. 16 9
203 41.43 humidity 80.0 1440 < th dose dependent rect. 15 20
209 41.45 humidity 80.0 1440 < th dose dependent rect. 15 4
211 41.46 wind 9.0 43200 < th dose independent rect. 10 5
226 41.48 radiation 1.0 1440 < th dose dependent rect. 18 7
227 41.48 radiation 1.0 1440 < th dose dependent rect. 18 9
233 41.50 wind 9.0 43200 > th dose independent rect. 10 5
245 41.52 precipitation 0.1 14400 > th dose independent rect. 5 2
249 41.52 radiation 40.0 43200 > th dose dependent rect. 10 1
262 41.55 humidity 90.0 14400 > th dose independent rect. 15 12
270 41.56 humidity 80.0 43200 < th dose dependent rect. 22 1
271 41.56 precipitation 0.1 14400 > th dose dependent rect. 5 2
272 41.56 wind 7.0 43200 > th dose dependent rect. 10 5
297 41.59 humidity 90.0 14400 > th dose dependent rect. 15 23
303 41.60 humidity 90.0 14400 > th dose dependent no NA NA
307 41.60 humidity 90.0 14400 > th dose dependent rect. 12 23
313 41.61 humidity 90.0 14400 > th dose independent rect. 2 21
325 41.62 humidity 90.0 14400 > th dose independent rect. 17 8
337 41.63 wind 1.0 43200 < th dose dependent rect. 23 5
345 41.64 wind 9.0 14400 < th dose dependent rect. 3 1
346 41.64 humidity 80.0 43200 < th dose dependent rect. 5 1
368 41.66 humidity 90.0 14400 > th dose dependent rect. 18 23
375 41.67 humidity 90.0 14400 > th dose dependent sin 23 NA
377 41.67 temperature 25.0 14400 < th dose dependent rect. 14 1
379 41.67 temperature 25.0 1440 > th dose dependent rect. 16 17
382 41.68 wind 9.0 43200 < th dose independent rect. 13 1
400 41.69 temperature 25.0 1440 > th dose dependent rect. 17 6
411 41.70 humidity 50.0 1440 > th dose dependent rect. 6 14
418 41.71 humidity 90.0 14400 < th dose independent rect. 24 22
419 41.71 radiation 1.0 1440 < th dose dependent rect. 18 2
459 41.75 temperature 25.0 1440 > th dose dependent rect. 17 1
467 41.76 humidity 50.0 14400 > th dose dependent rect. 17 1
511 41.80 humidity 90.0 14400 < th dose dependent rect. 17 1
512 41.80 wind 9.0 43200 > th dose dependent rect. 13 2
568 41.85 temperature 25.0 14400 > th dose independent rect. 4 12
571 41.85 humidity 70.0 1440 < th dose independent rect. 14 22
599 41.88 precipitation 0.1 14400 < th dose independent rect. 4 5
601 41.88 humidity 70.0 1440 < th dose independent rect. 9 11
618 41.88 precipitation 0.1 14400 < th dose dependent rect. 4 5
620 41.88 humidity 90.0 1440 < th dose dependent rect. 6 16
658 41.91 humidity 90.0 14400 < th dose independent rect. 15 4
662 41.91 humidity 90.0 14400 > th dose independent rect. 12 23
663 41.91 humidity 90.0 14400 > th dose independent rect. 15 23
664 41.91 humidity 90.0 14400 > th dose dependent rect. 22 1
672 41.92 humidity 90.0 14400 > th dose independent no NA NA
678 41.92 humidity 70.0 1440 > th dose independent rect. 9 16
679 41.92 humidity 70.0 1440 > th dose independent rect. 9 18
697 41.93 humidity 70.0 1440 > th dose independent rect. 9 11
734 41.95 humidity 80.0 43200 > th dose independent rect. 2 2
740 41.95 humidity 80.0 1440 < th dose dependent sin 17 NA
742 41.95 temperature 25.0 14400 < th dose dependent rect. 16 1
746 41.95 humidity 80.0 43200 < th dose dependent rect. 22 9
758 41.96 humidity 90.0 14400 > th dose independent rect. 15 20
794 41.98 radiation 40.0 43200 > th dose independent rect. 10 1
809 41.98 radiation 40.0 1440 < th dose dependent rect. 17 15
822 41.99 temperature 25.0 14400 < th dose independent rect. 4 12
827 41.99 humidity 70.0 1440 < th dose dependent sin 12 NA
875 42.01 wind 1.0 43200 < th dose independent rect. 1 1
876 42.01 humidity 90.0 14400 > th dose independent rect. 21 3
888 42.01 precipitation 0.1 14400 > th dose dependent rect. 4 5
910 42.02 humidity 60.0 14400 < th dose independent rect. 15 3
911 42.02 precipitation 0.1 14400 > th dose independent rect. 4 5
965 42.04 temperature 25.0 14400 > th dose independent sin 1 NA