Os10g0413400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glycerol-3-phosphate acyltransferase 6 (EC 2.3.1.15) (AtGPAT6).
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Os10g0413400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glycerol-3-phosphate acyltransferase 6 (EC 2.3.1.15) (AtGPAT6).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.62 | 0.592 | 5.03 | 0.615 | 0.64 | -1.52 | 0.61 | 0.549 | -0.336 | 8.02 | 21.3 | 901 | -- | -- |
| 159.39 | 0.588 | 5.05 | 0.485 | 0.639 | -1.56 | 0.441 | -- | -0.365 | 7.99 | 21.36 | 909 | -- | -- |
| 159.23 | 0.588 | 5.03 | 0.594 | 0.65 | -1.43 | -- | 0.531 | -0.306 | 7.97 | 21.9 | 939 | -- | -- |
| 159.98 | 0.589 | 5.05 | 0.492 | 0.64 | -1.56 | -- | -- | -0.368 | 8 | 21.33 | 909 | -- | -- |
| 178.96 | 0.623 | 5.03 | 0.598 | -- | -1.55 | -- | 0.424 | -0.263 | -- | 21.88 | 796 | -- | -- |
| 239.12 | 0.725 | 5.14 | -0.106 | 0.854 | -- | 0.376 | -- | -0.795 | 8.77 | -- | -- | -- | -- |
| 239.58 | 0.725 | 5.14 | -0.0929 | 0.852 | -- | -- | -- | -0.795 | 8.81 | -- | -- | -- | -- |
| 179.46 | 0.624 | 5.06 | 0.52 | -- | -1.68 | -- | -- | -0.329 | -- | 21.33 | 794 | -- | -- |
| 164 | 0.596 | 5.06 | -- | 0.665 | -1.31 | -- | -- | -0.42 | 8.08 | 22.05 | 901 | -- | -- |
| 280.88 | 0.783 | 5.16 | -0.0922 | -- | -- | -- | -- | -0.789 | -- | -- | -- | -- | -- |
| 239.81 | 0.724 | 5.14 | -- | 0.852 | -- | -- | -- | -0.785 | 8.82 | -- | -- | -- | -- |
| 184.44 | 0.633 | 5.07 | -- | -- | -1.45 | -- | -- | -0.376 | -- | 21.98 | 795 | -- | -- |
| 281.1 | 0.783 | 5.16 | -- | -- | -- | -- | -- | -0.778 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 6 | 158.89 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 66 | 162.94 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 80 | 163.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 81 | 163.58 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 19 |
| 84 | 163.63 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 101 | 164.23 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 114 | 164.77 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 12 |
| 115 | 164.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 121 | 164.88 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 141 | 165.41 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 142 | 165.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 173 | 166.19 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 177 | 166.26 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 16 |
| 178 | 166.26 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 185 | 166.37 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 18 |
| 237 | 167.14 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 20 |
| 250 | 167.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 303 | 168.03 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 390 | 168.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 403 | 168.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 405 | 169.00 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 430 | 169.21 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 439 | 169.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 443 | 169.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 530 | 169.82 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 584 | 170.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 585 | 170.08 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 595 | 170.18 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 23 |
| 642 | 170.35 | temperature | 20 | 720 | < th | dose independent | rect. | 11 | 23 |
| 643 | 170.36 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 6 |
| 683 | 170.56 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 930 | 172.12 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 23 |