Os10g0412800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0412800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.71 | 0.369 | 8.92 | -0.709 | 0.339 | -0.328 | -0.472 | -1.05 | 0.0417 | 10.7 | 1010 | 10767 | -- | -- |
| 65.04 | 0.376 | 8.94 | -1 | 0.305 | -0.253 | -0.444 | -- | 0.0411 | 10.9 | 1009 | 10690 | -- | -- |
| 62.64 | 0.369 | 8.92 | -0.725 | 0.339 | -0.328 | -- | -1.05 | 0.0367 | 10.7 | 1010 | 10765 | -- | -- |
| 65.24 | 0.376 | 8.95 | -1.09 | 0.349 | -0.335 | -- | -- | -0.00577 | 10.6 | 1010 | 9910 | -- | -- |
| 69.75 | 0.389 | 8.93 | -0.737 | -- | -0.328 | -- | -1.06 | 0.0329 | -- | 1010 | 11276 | -- | -- |
| 68.9 | 0.389 | 8.93 | -0.969 | 0.334 | -- | -0.471 | -- | 0.0621 | 10.5 | -- | -- | -- | -- |
| 69.81 | 0.391 | 8.93 | -0.988 | 0.337 | -- | -- | -- | 0.0606 | 10.5 | -- | -- | -- | -- |
| 72.27 | 0.396 | 8.95 | -1.09 | -- | -0.338 | -- | -- | -0.0093 | -- | 1010 | 10246 | -- | -- |
| 94.53 | 0.453 | 8.91 | -- | 0.342 | -0.221 | -- | -- | 0.176 | 10.5 | 1007 | 11927 | -- | -- |
| 76.77 | 0.409 | 8.94 | -0.994 | -- | -- | -- | -- | 0.0593 | -- | -- | -- | -- | -- |
| 95.55 | 0.457 | 8.91 | -- | 0.344 | -- | -- | -- | 0.171 | 10.7 | -- | -- | -- | -- |
| 101.68 | 0.47 | 8.91 | -- | -- | -0.211 | -- | -- | 0.179 | -- | 1007 | 11537 | -- | -- |
| 102.84 | 0.473 | 8.92 | -- | -- | -- | -- | -- | 0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.80 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 61.81 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 23 | 61.88 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 84 | 61.97 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 166 | 62.05 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 263 | 62.11 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 297 | 62.12 | humidity | 50.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 298 | 62.12 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 301 | 62.12 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 304 | 62.12 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 305 | 62.12 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 309 | 62.12 | atmosphere | 1010.0 | 14400 | > th | dose dependent | no | NA | NA |
| 351 | 62.13 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 390 | 62.13 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 22 | 23 |
| 420 | 62.15 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 421 | 62.15 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 505 | 62.18 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 506 | 62.18 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 562 | 62.20 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 573 | 62.21 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 601 | 62.22 | atmosphere | 1010.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 604 | 62.22 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 621 | 62.22 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 661 | 62.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 666 | 62.24 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 674 | 62.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 677 | 62.24 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 9 | 6 |
| 698 | 62.25 | humidity | 50.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 804 | 62.28 | atmosphere | 1010.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 874 | 62.29 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 3 | 9 |
| 875 | 62.29 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 931 | 62.30 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 3 | 21 |
| 960 | 62.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 966 | 62.31 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 988 | 62.31 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 22 | 19 |