Os10g0412600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0412600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.46 | 0.469 | 6.76 | -0.228 | 0.136 | -1.17 | -0.228 | -1.28 | -0.0105 | 15.5 | 25.87 | 42 | -- | -- |
| 101.68 | 0.47 | 6.77 | -0.389 | 0.156 | -1.03 | 0.227 | -- | -0.0151 | 14.3 | 26.35 | 33 | -- | -- |
| 99.58 | 0.465 | 6.76 | -0.252 | 0.136 | -1.15 | -- | -1.13 | -0.0138 | 15.2 | 25.9 | 42 | -- | -- |
| 101.75 | 0.47 | 6.78 | -0.41 | 0.149 | -1.05 | -- | -- | -0.038 | 14.8 | 26.1 | 42 | -- | -- |
| 100.32 | 0.467 | 6.77 | -0.291 | -- | -1.24 | -- | -1.1 | -0.0359 | -- | 26.2 | 39 | -- | -- |
| 118.14 | 0.51 | 6.73 | -0.181 | 0.4 | -- | 0.334 | -- | 0.177 | 14.3 | -- | -- | -- | -- |
| 118.55 | 0.51 | 6.73 | -0.172 | 0.402 | -- | -- | -- | 0.179 | 14.4 | -- | -- | -- | -- |
| 102.45 | 0.471 | 6.79 | -0.46 | -- | -1.17 | -- | -- | -0.0828 | -- | 26.6 | 33 | -- | -- |
| 106.16 | 0.48 | 6.77 | -- | 0.176 | -0.91 | -- | -- | 0.015 | 14.6 | 26.11 | 35 | -- | -- |
| 128.11 | 0.529 | 6.73 | -0.189 | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
| 119.33 | 0.511 | 6.73 | -- | 0.406 | -- | -- | -- | 0.198 | 14.4 | -- | -- | -- | -- |
| 107.52 | 0.485 | 6.77 | -- | -- | -1.02 | -- | -- | -0.00192 | -- | 26.6 | 34 | -- | -- |
| 129.05 | 0.53 | 6.73 | -- | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.36 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 3 | 97.72 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 15 |
| 6 | 98.18 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 7 | 98.21 | temperature | 25 | 90 | < th | dose dependent | rect. | 10 | 21 |
| 12 | 98.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 19 |
| 14 | 98.38 | temperature | 25 | 30 | < th | dose dependent | sin | 4 | NA |
| 15 | 98.40 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 24 | 98.55 | temperature | 30 | 10 | < th | dose dependent | sin | 6 | NA |
| 44 | 98.95 | temperature | 20 | 90 | > th | dose independent | rect. | 5 | 22 |
| 81 | 99.64 | temperature | 15 | 10 | > th | dose dependent | sin | 7 | NA |
| 116 | 99.94 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 22 |
| 134 | 100.10 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 149 | 100.24 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 21 |
| 186 | 100.54 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 187 | 100.55 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 194 | 100.58 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 201 | 100.61 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 205 | 100.65 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 217 | 100.76 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 236 | 100.88 | temperature | 10 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 242 | 100.93 | temperature | 10 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 276 | 101.14 | temperature | 20 | 10 | > th | dose independent | sin | 3 | NA |
| 291 | 101.34 | temperature | 20 | 10 | < th | dose independent | sin | 3 | NA |
| 376 | 101.84 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 22 |
| 391 | 101.89 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 422 | 102.11 | temperature | 20 | 10 | < th | dose dependent | sin | 23 | NA |
| 428 | 102.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 430 | 102.15 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 22 |
| 436 | 102.17 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 20 |
| 447 | 102.22 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 11 |
| 466 | 102.29 | temperature | 20 | 10 | < th | dose independent | rect. | 2 | 11 |
| 475 | 102.32 | temperature | 20 | 10 | < th | dose independent | rect. | 2 | 14 |
| 501 | 102.42 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 14 |
| 509 | 102.46 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 15 |
| 519 | 102.49 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 16 |
| 546 | 102.57 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 13 |
| 552 | 102.60 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 18 |
| 668 | 102.94 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 852 | 103.36 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 867 | 103.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 869 | 103.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 12 |