Os10g0411600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0411600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.98 | 0.515 | 2.88 | -0.338 | 0.112 | -0.27 | -0.228 | 2.49 | 0.19 | 7.72 | 29.98 | 10 | -- | -- |
| 121.83 | 0.518 | 2.85 | -0.124 | 0.126 | -0.1 | -0.246 | -- | 0.222 | 8.18 | 29.98 | 10 | -- | -- |
| 119.92 | 0.514 | 2.87 | -0.303 | 0.121 | -0.249 | -- | 1.91 | 0.194 | 7.64 | 29.98 | 10 | -- | -- |
| 122 | 0.518 | 2.85 | -0.133 | 0.128 | -0.108 | -- | -- | 0.222 | 7.8 | 29.98 | 10 | -- | -- |
| 120.7 | 0.514 | 2.88 | -0.303 | -- | -0.239 | -- | 1.96 | 0.195 | -- | 29.98 | 10 | -- | -- |
| 122.22 | 0.518 | 2.85 | -0.109 | 0.121 | -- | -0.252 | -- | 0.22 | 8.88 | -- | -- | -- | -- |
| 122.44 | 0.518 | 2.85 | -0.118 | 0.122 | -- | -- | -- | 0.22 | 8.84 | -- | -- | -- | -- |
| 122.89 | 0.519 | 2.86 | -0.13 | -- | -0.0968 | -- | -- | 0.223 | -- | 29.98 | 10 | -- | -- |
| 122.46 | 0.518 | 2.85 | -- | 0.126 | -0.0951 | -- | -- | 0.236 | 7.99 | 29.98 | 10 | -- | -- |
| 123.29 | 0.519 | 2.86 | -0.117 | -- | -- | -- | -- | 0.221 | -- | -- | -- | -- | -- |
| 122.8 | 0.518 | 2.85 | -- | 0.122 | -- | -- | -- | 0.233 | 8.91 | -- | -- | -- | -- |
| 123.33 | 0.519 | 2.85 | -- | -- | -0.0869 | -- | -- | 0.237 | -- | 29.98 | 10 | -- | -- |
| 123.65 | 0.519 | 2.85 | -- | -- | -- | -- | -- | 0.234 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.72 | wind | 7.0 | 90 | > th | dose independent | rect. | 22 | 1 |
| 3 | 112.72 | wind | 7.0 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 6 | 112.74 | wind | 9.0 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 7 | 112.75 | wind | 9.0 | 90 | > th | dose independent | rect. | 22 | 12 |
| 8 | 112.77 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 20 | 112.77 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 152 | 115.99 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 220 | 116.45 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 224 | 116.47 | humidity | 80.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 266 | 116.71 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 281 | 116.90 | temperature | 25.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 282 | 116.90 | wind | 5.0 | 270 | > th | dose dependent | rect. | 20 | 4 |
| 283 | 116.91 | humidity | 70.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 287 | 116.97 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 291 | 116.97 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 294 | 116.97 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 297 | 116.98 | radiation | 40.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 299 | 116.99 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 301 | 117.04 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 306 | 117.10 | wind | 3.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 314 | 117.18 | humidity | 60.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 315 | 117.18 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 318 | 117.20 | wind | 5.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 323 | 117.26 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 347 | 117.49 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 349 | 117.49 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 352 | 117.49 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 1 |
| 353 | 117.49 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 354 | 117.49 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 377 | 117.57 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 379 | 117.58 | wind | 9.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 385 | 117.61 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 422 | 117.76 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 424 | 117.77 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 433 | 117.83 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 550 | 118.65 | temperature | 30.0 | 10 | < th | dose independent | rect. | 7 | 8 |
| 553 | 118.68 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 580 | 118.68 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 613 | 118.72 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 619 | 118.79 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 13 | 23 |
| 620 | 118.79 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 661 | 118.89 | wind | 9.0 | 720 | < th | dose independent | rect. | 16 | 9 |
| 694 | 118.99 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 15 | 2 |
| 709 | 119.02 | wind | 9.0 | 720 | < th | dose independent | rect. | 13 | 15 |
| 727 | 119.06 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 742 | 119.09 | humidity | 50.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 752 | 119.14 | wind | 7.0 | 720 | < th | dose independent | rect. | 20 | 8 |
| 792 | 119.23 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 813 | 119.23 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 876 | 119.24 | radiation | 20.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 906 | 119.25 | humidity | 90.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 956 | 119.29 | humidity | 60.0 | 10 | < th | dose independent | rect. | 15 | 3 |
| 973 | 119.30 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 14 | 4 |
| 975 | 119.32 | humidity | 60.0 | 90 | < th | dose independent | rect. | 15 | 2 |
| 980 | 119.34 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 998 | 119.35 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 1 |