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Os10g0410600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phosphoprotein phosphatase 2A isoform 4.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.46 (0.0116) R2 : 0.513
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.6 (0.028) R2dC : 0.491 R2C : 0.49
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.1 (0.0243) R2dN8 : 0.0233 R2N8 : 0.0217
σ : 0.218
deviance : 21.75
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_____
C
peak time of C : 1.66
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.97 0.188 9.45 0.0238 0.199 -0.434 -0.388 0.258 0.129 3.03 10.2 123 -- --
16.15 0.187 9.46 0.00427 0.189 -0.432 -0.472 -- 0.114 2.47 10.23 130 -- --
16.23 0.188 9.45 0.0209 0.2 -0.435 -- 0.479 0.128 3.02 10.22 122 -- --
17.37 0.194 9.45 0.0332 0.198 -0.428 -- -- 0.12 2.84 10.18 130 -- --
17.03 0.192 9.44 0.0537 -- -0.573 -- 0.453 0.155 -- 10.19 164 -- --
20.89 0.214 9.47 -0.0444 0.601 -- -0.463 -- 0.0941 1.7 -- -- -- --
21.73 0.218 9.46 -0.0294 0.6 -- -- -- 0.0969 1.66 -- -- -- --
18.06 0.198 9.45 0.0559 -- -0.567 -- -- 0.143 -- 10.19 164 -- --
17.39 0.194 9.46 -- 0.204 -0.421 -- -- 0.12 2.79 10.27 129 -- --
43.69 0.309 9.46 -0.00512 -- -- -- -- 0.11 -- -- -- -- --
21.75 0.218 9.46 -- 0.6 -- -- -- 0.1 1.66 -- -- -- --
18.14 0.198 9.45 -- -- -0.553 -- -- 0.134 -- 10.01 164 -- --
43.7 0.309 9.46 -- -- -- -- -- 0.111 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.98 humidity 60 10 > th dose dependent sin 0 NA
2 16.01 radiation 10 90 > th dose independent sin 1 NA
4 16.03 radiation 10 270 > th dose independent sin 4 NA
10 16.14 radiation 20 90 < th dose dependent sin 0 NA
15 16.21 radiation 10 90 > th dose independent rect. 17 23
16 16.22 radiation 30 90 < th dose dependent rect. 11 23
19 16.26 radiation 10 270 > th dose independent rect. 17 21
24 16.32 radiation 10 270 > th dose independent rect. 6 9
57 16.38 radiation 10 90 > th dose independent rect. 7 11
70 16.38 humidity 60 10 > th dose dependent rect. 24 23
72 16.39 humidity 60 90 > th dose dependent rect. 24 23
94 16.46 radiation 10 90 > th dose independent no NA NA
174 16.47 humidity 60 10 > th dose dependent rect. 5 15
191 16.50 humidity 60 270 > th dose dependent rect. 24 19
193 16.51 radiation 20 270 < th dose dependent sin 4 NA
215 16.58 radiation 20 270 < th dose dependent rect. 21 22
244 16.65 radiation 20 90 < th dose dependent no NA NA
247 16.65 temperature 30 90 < th dose dependent rect. 3 16
253 16.66 humidity 60 90 > th dose dependent rect. 3 16
258 16.67 radiation 20 270 < th dose dependent rect. 1 14
260 16.68 radiation 20 270 < th dose dependent rect. 1 16
263 16.70 humidity 70 90 > th dose independent rect. 3 16
300 16.73 radiation 20 90 < th dose dependent rect. 15 23
303 16.74 temperature 30 10 < th dose dependent rect. 5 15
311 16.75 radiation 30 30 < th dose dependent rect. 9 23
335 16.79 radiation 20 90 < th dose dependent rect. 5 14
359 16.82 temperature 30 90 < th dose dependent rect. 3 18
396 16.85 humidity 90 10 < th dose dependent sin 1 NA
423 16.87 radiation 30 90 < th dose dependent rect. 24 23
483 16.93 humidity 90 270 < th dose dependent rect. 19 19
486 16.93 humidity 60 10 > th dose dependent rect. 13 23
497 16.95 humidity 90 10 < th dose dependent rect. 7 9
501 16.95 humidity 60 10 > th dose dependent rect. 3 17
512 16.96 radiation 10 10 > th dose independent sin 0 NA
530 16.97 humidity 90 10 < th dose dependent rect. 23 17
569 17.00 radiation 1 90 > th dose dependent rect. 7 11
604 17.01 temperature 20 10 > th dose dependent sin 1 NA
636 17.02 humidity 60 10 > th dose dependent rect. 11 23
638 17.03 humidity 80 270 > th dose independent rect. 24 15
647 17.03 humidity 90 10 < th dose dependent rect. 21 19
661 17.05 radiation 1 90 > th dose dependent no NA NA
758 17.07 humidity 60 10 > th dose dependent rect. 3 20
769 17.08 radiation 10 270 < th dose independent rect. 1 17
786 17.09 radiation 10 90 < th dose independent sin 0 NA
794 17.09 temperature 20 10 > th dose dependent rect. 7 9
801 17.09 humidity 60 10 > th dose dependent rect. 9 23
802 17.10 temperature 30 270 < th dose independent rect. 2 16
808 17.10 humidity 60 10 > th dose dependent no NA NA
824 17.11 humidity 80 90 < th dose independent rect. 8 8
880 17.13 radiation 20 10 < th dose dependent rect. 5 18
888 17.13 humidity 60 10 > th dose dependent rect. 15 23
919 17.15 radiation 40 270 < th dose independent rect. 9 22
921 17.15 radiation 10 10 > th dose independent rect. 17 23
923 17.15 humidity 90 10 < th dose dependent rect. 4 12
962 17.16 radiation 1 90 > th dose dependent rect. 17 23
984 17.17 radiation 1 90 > th dose dependent sin 1 NA
996 17.17 radiation 20 10 < th dose dependent rect. 5 16