Os10g0410100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0410100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.04 | 0.415 | 7.35 | 1.13 | 1.03 | -1.32 | -0.206 | 4.02 | 0.397 | 17.3 | 16.97 | 306 | -- | -- |
| 86.03 | 0.435 | 7.43 | 0.427 | 0.975 | -1.46 | 0.826 | -- | 0.218 | 16.3 | 15 | 37 | -- | -- |
| 78.13 | 0.412 | 7.35 | 1.11 | 1.03 | -1.32 | -- | 3.93 | 0.395 | 17.3 | 16.84 | 305 | -- | -- |
| 87.84 | 0.437 | 7.43 | 0.437 | 0.976 | -1.42 | -- | -- | 0.219 | 16.4 | 15.2 | 21 | -- | -- |
| 100.08 | 0.466 | 7.34 | 1.07 | -- | -1.22 | -- | 2.66 | 0.366 | -- | -3.002 | 1304 | -- | -- |
| 107.49 | 0.486 | 7.47 | 0.15 | 0.642 | -- | 0.581 | -- | 0.0103 | 17.6 | -- | -- | -- | -- |
| 108.32 | 0.487 | 7.47 | 0.147 | 0.646 | -- | -- | -- | 0.0127 | 17.6 | -- | -- | -- | -- |
| 107.94 | 0.484 | 7.41 | 0.548 | -- | -1.03 | -- | -- | 0.211 | -- | 8.03 | 2744 | -- | -- |
| 92.24 | 0.45 | 7.44 | -- | 0.913 | -1.21 | -- | -- | 0.146 | 16.4 | 15.2 | 22 | -- | -- |
| 130.01 | 0.533 | 7.46 | 0.126 | -- | -- | -- | -- | -0.00286 | -- | -- | -- | -- | -- |
| 108.89 | 0.488 | 7.47 | -- | 0.644 | -- | -- | -- | -0.00365 | 17.6 | -- | -- | -- | -- |
| 111.66 | 0.492 | 7.43 | -- | -- | -0.971 | -- | -- | 0.127 | -- | 14.9 | 1291 | -- | -- |
| 130.43 | 0.533 | 7.46 | -- | -- | -- | -- | -- | -0.0169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 2 | 75.81 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 13 | 77.10 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 30 | 77.65 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 31 | 77.65 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 22 |
| 40 | 77.85 | temperature | 15 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 41 | 77.88 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 42 | 77.88 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 45 | 77.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 84 | 78.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 93 | 78.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 101 | 78.29 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 119 | 78.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 124 | 78.38 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 161 | 78.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 20 |
| 171 | 78.51 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 181 | 78.55 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 182 | 78.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 183 | 78.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 184 | 78.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 188 | 78.56 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 200 | 78.59 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 212 | 78.60 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 225 | 78.61 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 232 | 78.62 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 245 | 78.64 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 255 | 78.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 268 | 78.67 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 296 | 78.71 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 314 | 78.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 316 | 78.74 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 361 | 78.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 12 |
| 365 | 78.80 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 402 | 78.84 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 428 | 78.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 435 | 78.88 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 475 | 78.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 488 | 78.94 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 519 | 78.97 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 533 | 78.98 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 539 | 78.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 558 | 79.01 | radiation | 1 | 4320 | < th | dose dependent | rect. | 2 | 3 |
| 580 | 79.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 595 | 79.05 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 603 | 79.05 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 611 | 79.06 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 623 | 79.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 627 | 79.08 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 677 | 79.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 692 | 79.15 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 701 | 79.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 720 | 79.19 | temperature | 15 | 30 | > th | dose dependent | no | NA | NA |
| 722 | 79.19 | wind | 7 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 744 | 79.21 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 878 | 79.37 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 9 |
| 900 | 79.39 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 967 | 79.46 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 983 | 79.48 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 987 | 79.48 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |