Os10g0403700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AX110P-like protein.
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Os10g0403700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AX110P-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.66 | 0.347 | 10.7 | 0.45 | 0.515 | -1.27 | -1.18 | 0.503 | -0.199 | 21.9 | 21.36 | 1326 | -- | -- |
| 55.24 | 0.346 | 10.7 | 0.325 | 0.523 | -1.32 | -1.17 | -- | -0.211 | 21.9 | 21.37 | 1330 | -- | -- |
| 59.98 | 0.361 | 10.7 | 0.466 | 0.516 | -1.28 | -- | 0.391 | -0.205 | 22.1 | 21.38 | 1335 | -- | -- |
| 60.31 | 0.362 | 10.7 | 0.36 | 0.516 | -1.3 | -- | -- | -0.224 | 22.1 | 21.32 | 1334 | -- | -- |
| 74.2 | 0.401 | 10.7 | 0.511 | -- | -1.27 | -- | 0.514 | -0.198 | -- | 21.33 | 1509 | -- | -- |
| 104.36 | 0.479 | 10.8 | -0.21 | 0.473 | -- | -1.15 | -- | -0.59 | 21.4 | -- | -- | -- | -- |
| 109.12 | 0.489 | 10.8 | -0.17 | 0.476 | -- | -- | -- | -0.589 | 21.6 | -- | -- | -- | -- |
| 74.74 | 0.403 | 10.7 | 0.38 | -- | -1.31 | -- | -- | -0.227 | -- | 21.4 | 1492 | -- | -- |
| 63.37 | 0.371 | 10.7 | -- | 0.517 | -1.19 | -- | -- | -0.294 | 22.1 | 21.37 | 1319 | -- | -- |
| 122.52 | 0.517 | 10.8 | -0.166 | -- | -- | -- | -- | -0.59 | -- | -- | -- | -- | -- |
| 109.88 | 0.49 | 10.8 | -- | 0.476 | -- | -- | -- | -0.571 | 21.6 | -- | -- | -- | -- |
| 78 | 0.411 | 10.7 | -- | -- | -1.18 | -- | -- | -0.308 | -- | 21.39 | 1471 | -- | -- |
| 123.25 | 0.518 | 10.8 | -- | -- | -- | -- | -- | -0.572 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 8 |
| 16 | 54.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 44 | 55.42 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 48 | 55.43 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 59 | 55.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 69 | 55.62 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 77 | 55.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 82 | 55.69 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 100 | 55.79 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 118 | 55.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 125 | 55.88 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 135 | 55.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 380 | 56.80 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 385 | 56.81 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 456 | 57.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 469 | 57.17 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 520 | 57.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 537 | 57.44 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 543 | 57.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 575 | 57.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 589 | 57.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 639 | 57.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |