Os10g0403000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 78A11.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0403000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cytochrome P450 78A11.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 327.19 | 0.85 | 11 | 1.28 | 2.2 | -2.45 | 2.2 | -1.57 | -0.595 | 10.1 | 21.4 | 1394 | -- | -- |
| 325.58 | 0.84 | 11 | 1.47 | 1.96 | -2.08 | 2.4 | -- | -0.479 | 9.98 | 22.1 | 984 | -- | -- |
| 346.13 | 0.866 | 11 | 1.32 | 2.18 | -2.44 | -- | -1.72 | -0.604 | 10.1 | 21.44 | 1370 | -- | -- |
| 342.72 | 0.862 | 11 | 1.5 | 1.86 | -2.03 | -- | -- | -0.517 | 10.1 | 22.05 | 889 | -- | -- |
| 525.11 | 1.07 | 11.1 | 1.06 | -- | -2.61 | -- | -2.2 | -0.563 | -- | 21.8 | 824 | -- | -- |
| 491.82 | 1.04 | 11.1 | 0.728 | 2.25 | -- | 2.11 | -- | -1.17 | 10.2 | -- | -- | -- | -- |
| 509.53 | 1.06 | 11.1 | 0.812 | 2.24 | -- | -- | -- | -1.17 | 10.2 | -- | -- | -- | -- |
| 538.77 | 1.08 | 11 | 1.66 | -- | -2.55 | -- | -- | -0.364 | -- | 21.9 | 844 | -- | -- |
| 396.69 | 0.928 | 11 | -- | 1.9 | -1.68 | -- | -- | -0.752 | 10.1 | 22.2 | 886 | -- | -- |
| 814.3 | 1.33 | 11.2 | 0.779 | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
| 526.91 | 1.07 | 11.1 | -- | 2.24 | -- | -- | -- | -1.26 | 10.2 | -- | -- | -- | -- |
| 604.28 | 1.14 | 11 | -- | -- | -2.14 | -- | -- | -0.613 | -- | 22.25 | 846 | -- | -- |
| 830.3 | 1.34 | 11.2 | -- | -- | -- | -- | -- | -1.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 333.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 2 | 334.24 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 5 | 335.68 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 36 | 338.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 41 | 338.70 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 43 | 338.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 44 | 338.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 57 | 339.29 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 69 | 340.32 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 70 | 340.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 81 | 340.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 83 | 340.99 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 105 | 342.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 137 | 343.64 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 144 | 343.79 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 147 | 343.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 166 | 344.15 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 167 | 344.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 403 | 347.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 433 | 347.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 522 | 348.90 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 549 | 349.27 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 596 | 349.87 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 671 | 350.79 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 945 | 354.22 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |