Os10g0401000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0401000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 465.96 | 1.01 | 9.24 | -1.07 | 2.89 | 5.55 | 0.802 | 12.3 | 0.529 | 20.8 | 1 | 1526 | 18 | -- |
| 486.6 | 1.03 | 8.98 | -0.238 | 3.27 | 3.45 | 0.879 | -- | 0.986 | 20.4 | 3.344 | 1555 | 19.9 | -- |
| 467.38 | 1.01 | 9.24 | -1.12 | 2.82 | 5.53 | -- | 12.6 | 0.527 | 20.9 | 0.9003 | 1529 | 17.5 | -- |
| 487.57 | 1.03 | 9.01 | -0.166 | 3.2 | 3.15 | -- | -- | 0.873 | 20.5 | 3.352 | 1541 | 20.2 | -- |
| 705.47 | 1.24 | 9.05 | -0.818 | -- | 3.11 | -- | 1.5 | 0.306 | -- | 0.8392 | 1570 | 13.2 | -- |
| 596.55 | 1.15 | 9.13 | -0.868 | 3 | -- | 0.912 | -- | 0.318 | 20.9 | -- | -- | -- | -- |
| 599.36 | 1.15 | 9.13 | -0.9 | 3 | -- | -- | -- | 0.317 | 20.9 | -- | -- | -- | -- |
| 588.33 | 1.13 | 9.03 | -0.868 | -- | 3.06 | -- | -- | 0.37 | -- | 57.98 | 129 | 10.9 | -- |
| 487.68 | 1.03 | 9 | -- | 3.09 | 3.2 | -- | -- | 0.916 | 20.6 | 3.41 | 1537 | 19.9 | -- |
| 1113.69 | 1.56 | 9.05 | -0.898 | -- | -- | -- | -- | 0.297 | -- | -- | -- | -- | -- |
| 620.72 | 1.17 | 9.11 | -- | 3 | -- | -- | -- | 0.417 | 20.9 | -- | -- | -- | -- |
| 605.27 | 1.15 | 9 | -- | -- | 3.09 | -- | -- | 0.494 | -- | 73.79 | 124 | 10.8 | -- |
| 1134.97 | 1.57 | 9.02 | -- | -- | -- | -- | -- | 0.397 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 460.87 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 3 | 463.98 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 4 | 464.56 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 6 | 467.97 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 7 | 468.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 8 | 468.14 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 12 | 469.20 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 13 | 469.23 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 14 | 469.25 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 18 | 469.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 21 | 469.94 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 32 | 470.84 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 36 | 471.09 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 40 | 471.15 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 49 | 471.15 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 61 | 472.03 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 16 |
| 69 | 472.10 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 14 |
| 77 | 472.23 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 100 | 472.61 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 104 | 472.68 | humidity | 70.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 134 | 472.89 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 7 |
| 138 | 472.93 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 174 | 473.19 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 4 |
| 182 | 473.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 183 | 473.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 6 |
| 184 | 473.36 | humidity | 70.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 221 | 473.70 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 264 | 474.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 284 | 474.36 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 302 | 474.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 309 | 474.58 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 311 | 474.59 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 334 | 474.72 | temperature | 30.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 389 | 475.14 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 424 | 475.29 | temperature | 30.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 438 | 475.39 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 440 | 475.40 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 455 | 475.50 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 493 | 475.61 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 499 | 475.64 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 4 |
| 504 | 475.69 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 539 | 475.92 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 588 | 476.15 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 637 | 476.39 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 640 | 476.41 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 645 | 476.43 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 20 |
| 649 | 476.46 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 18 |
| 653 | 476.47 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 703 | 476.57 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 23 |
| 721 | 476.61 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 722 | 476.61 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 741 | 476.65 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 772 | 476.73 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 15 |
| 811 | 476.77 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 838 | 476.83 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 6 |
| 876 | 476.89 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 882 | 476.90 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 895 | 476.91 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 940 | 477.00 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 958 | 477.06 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 5 |
| 966 | 477.08 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 18 |
| 975 | 477.09 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 982 | 477.10 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 7 | 14 |