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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0400700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.12 (0.0196) R2 : 0.0123
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0984 (0.0413) R2dN8 : 0.0159 R2N8 : 0.0123
σ : 0.369
deviance : 62.49
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.89 0.364 3.15 0.151 0.125 -0.279 0.18 -1.48 -0.125 8.04 4.974 4578 -- --
60.63 0.363 3.12 0.196 0.127 -0.253 0.218 -- -0.0879 8.12 4.859 9812 -- --
59.96 0.361 3.15 0.163 0.122 -0.279 -- -1.45 -0.126 7.95 4.9 4568 -- --
60.64 0.363 3.12 0.205 0.129 -0.249 -- -- -0.0868 8.68 4.9 9808 -- --
60.79 0.363 3.15 0.155 -- -0.267 -- -1.44 -0.126 -- 4.9 4542 -- --
61.28 0.367 3.11 0.111 0.118 -- 0.159 -- -0.0865 8.69 -- -- -- --
61.36 0.367 3.11 0.116 0.118 -- -- -- -0.0866 8.53 -- -- -- --
61.48 0.365 3.11 0.21 -- -0.246 -- -- -0.0722 -- 5.1 9868 -- --
61.57 0.365 3.12 -- 0.122 -0.117 -- -- -0.101 8.53 4.3 9812 -- --
62.14 0.368 3.12 0.116 -- -- -- -- -0.0855 -- -- -- -- --
61.71 0.367 3.12 -- 0.118 -- -- -- -0.0995 8.46 -- -- -- --
62.38 0.368 3.12 -- -- -0.1 -- -- -0.1 -- 4.443 9838 -- --
62.49 0.369 3.12 -- -- -- -- -- -0.0984 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.65 radiation 10.0 10 < th dose independent rect. 9 1
5 49.76 radiation 10.0 10 < th dose dependent rect. 10 1
9 49.95 wind 1.0 10 < th dose dependent rect. 9 1
11 50.07 wind 1.0 30 < th dose independent rect. 9 1
61 55.58 humidity 80.0 10 > th dose dependent rect. 10 1
70 56.13 radiation 10.0 10 < th dose independent rect. 9 17
104 57.03 radiation 20.0 10 < th dose dependent rect. 9 17
108 57.10 precipitation 0.1 1440 > th dose independent rect. 12 1
110 57.10 precipitation 0.1 1440 > th dose dependent rect. 12 1
133 57.25 wind 1.0 1440 < th dose independent rect. 17 1
136 57.27 temperature 25.0 90 > th dose independent rect. 8 2
143 57.35 wind 1.0 1440 > th dose independent rect. 17 1
144 57.35 humidity 80.0 90 > th dose independent rect. 8 2
146 57.36 wind 1.0 1440 < th dose dependent rect. 17 1
149 57.37 humidity 80.0 10 > th dose independent rect. 9 1
163 57.44 radiation 10.0 270 < th dose dependent rect. 11 1
212 57.74 temperature 20.0 10 > th dose dependent rect. 1 1
256 58.04 atmosphere 995.0 30 > th dose independent rect. 10 23
260 58.05 temperature 30.0 30 < th dose independent rect. 9 1
276 58.11 atmosphere 1005.0 90 > th dose dependent rect. 2 1
278 58.13 humidity 90.0 90 < th dose independent rect. 9 1
315 58.26 wind 9.0 10 < th dose independent rect. 10 23
325 58.29 temperature 10.0 1440 > th dose independent rect. 10 1
328 58.29 atmosphere 995.0 1440 > th dose independent rect. 10 1
333 58.29 temperature 10.0 1440 > th dose independent rect. 11 23
337 58.30 wind 9.0 30 < th dose independent rect. 9 1
338 58.30 temperature 10.0 30 > th dose independent rect. 9 1
340 58.30 humidity 50.0 30 > th dose independent rect. 9 1
341 58.30 atmosphere 995.0 30 > th dose independent rect. 9 1
342 58.30 atmosphere 1015.0 30 < th dose independent rect. 9 1
343 58.30 radiation 1.0 30 > th dose independent rect. 9 1
344 58.30 precipitation 0.1 30 < th dose independent rect. 9 1
348 58.30 temperature 10.0 30 > th dose independent rect. 10 23
349 58.30 precipitation 0.1 30 < th dose dependent rect. 9 1
377 58.34 temperature 10.0 30 > th dose dependent rect. 9 1
378 58.34 radiation 1.0 43200 < th dose dependent rect. 3 1
395 58.36 atmosphere 995.0 30 > th dose dependent rect. 9 1
408 58.39 precipitation 0.1 720 < th dose independent rect. 17 5
413 58.39 precipitation 0.1 720 < th dose dependent rect. 17 5
422 58.42 temperature 25.0 30 < th dose independent rect. 2 1
476 58.47 precipitation 0.1 1440 < th dose independent rect. 10 1
478 58.47 precipitation 0.1 1440 < th dose dependent rect. 10 1
503 58.51 temperature 25.0 90 > th dose independent rect. 24 10
513 58.53 wind 1.0 30 < th dose independent rect. 2 1
548 58.56 radiation 40.0 90 < th dose independent rect. 15 11
558 58.57 atmosphere 995.0 90 > th dose independent rect. 2 13
587 58.59 wind 1.0 720 > th dose independent rect. 17 5
621 58.62 radiation 40.0 10 < th dose dependent rect. 14 12
640 58.64 temperature 10.0 90 > th dose independent rect. 15 11
641 58.64 temperature 10.0 90 > th dose independent rect. 2 13
642 58.64 atmosphere 1015.0 90 < th dose independent rect. 2 13
647 58.65 atmosphere 1005.0 90 > th dose independent rect. 2 1
652 58.65 precipitation 0.1 270 < th dose independent rect. 21 13
661 58.65 precipitation 0.1 270 < th dose dependent rect. 21 13
682 58.67 wind 3.0 30 < th dose dependent rect. 2 1
694 58.69 temperature 20.0 30 > th dose independent rect. 2 1
698 58.69 wind 9.0 90 < th dose independent rect. 15 11
700 58.69 wind 9.0 90 < th dose independent rect. 2 13
705 58.70 wind 1.0 30 > th dose independent rect. 9 1
709 58.70 humidity 50.0 270 > th dose independent rect. 21 13
741 58.73 wind 9.0 720 < th dose independent rect. 22 19
752 58.74 temperature 10.0 270 > th dose dependent rect. 3 1
761 58.75 wind 7.0 270 < th dose independent rect. 21 13
762 58.75 precipitation 0.1 90 < th dose independent rect. 2 13
763 58.75 precipitation 0.1 90 < th dose dependent rect. 2 13
770 58.76 temperature 10.0 270 > th dose independent rect. 10 11
772 58.76 temperature 10.0 270 > th dose independent rect. 21 13
773 58.76 atmosphere 995.0 270 > th dose independent rect. 21 13
775 58.76 precipitation 0.1 30 < th dose independent rect. 10 23
778 58.76 precipitation 0.1 30 < th dose dependent rect. 10 23
781 58.77 temperature 10.0 30 > th dose independent rect. 2 1
784 58.77 humidity 50.0 30 > th dose independent rect. 2 1
790 58.77 atmosphere 1010.0 30 < th dose independent rect. 2 1
792 58.77 radiation 1.0 30 < th dose independent rect. 2 1
797 58.77 precipitation 0.1 30 < th dose independent rect. 2 1
801 58.77 temperature 10.0 30 > th dose independent rect. 3 23
803 58.77 radiation 1.0 30 < th dose dependent rect. 2 1
809 58.77 precipitation 0.1 30 < th dose dependent rect. 2 1
812 58.78 wind 7.0 720 < th dose independent rect. 17 5
824 58.79 temperature 10.0 720 > th dose independent rect. 17 5
825 58.79 humidity 50.0 720 > th dose independent rect. 5 5
826 58.79 radiation 20.0 720 < th dose independent rect. 17 5
829 58.79 wind 9.0 270 < th dose independent rect. 10 11
835 58.79 temperature 10.0 720 > th dose independent rect. 22 19
842 58.80 temperature 15.0 720 > th dose independent rect. 14 3
846 58.80 humidity 50.0 30 > th dose dependent rect. 2 1
860 58.81 precipitation 0.1 90 < th dose independent rect. 15 11
867 58.81 precipitation 0.1 90 < th dose dependent rect. 15 11
868 58.81 wind 9.0 30 < th dose dependent rect. 10 23
879 58.82 wind 7.0 720 < th dose independent rect. 22 4
880 58.82 wind 9.0 720 < th dose independent rect. 5 5
881 58.82 temperature 10.0 720 > th dose independent rect. 5 5
882 58.82 atmosphere 995.0 720 > th dose independent rect. 5 5
883 58.82 atmosphere 1015.0 720 < th dose independent rect. 5 5
887 58.82 temperature 10.0 720 > th dose independent rect. 10 19
892 58.82 radiation 1.0 4320 < th dose dependent rect. 3 1
900 58.83 wind 9.0 1440 < th dose independent rect. 3 1
902 58.83 temperature 10.0 1440 > th dose independent rect. 3 1
907 58.83 temperature 30.0 1440 < th dose independent rect. 3 1
911 58.83 humidity 50.0 1440 > th dose independent rect. 3 1
921 58.83 atmosphere 995.0 1440 > th dose independent rect. 3 1
925 58.83 radiation 1.0 1440 < th dose independent rect. 3 1
956 58.83 temperature 10.0 1440 > th dose independent rect. 4 23
977 58.84 atmosphere 1015.0 720 < th dose independent rect. 14 3
980 58.84 precipitation 0.1 720 < th dose independent rect. 22 4
981 58.84 humidity 90.0 90 < th dose independent rect. 5 5
985 58.84 wind 9.0 720 < th dose independent rect. 14 20
986 58.84 temperature 10.0 720 > th dose independent rect. 17 21
990 58.84 temperature 15.0 90 > th dose dependent rect. 3 4
991 58.84 precipitation 0.1 720 < th dose dependent rect. 22 4
996 58.85 wind 1.0 720 > th dose independent rect. 14 3
997 58.85 wind 7.0 720 < th dose independent rect. 2 3
1000 58.85 temperature 10.0 720 > th dose independent rect. 2 3