Os10g0397900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0397900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 219.67 | 0.696 | 3.35 | 0.355 | 0.0278 | -1.02 | -0.463 | -1.75 | -0.376 | 18.2 | 81.69 | 4030 | -- | -- |
| 222.37 | 0.695 | 3.36 | 0.225 | 0.0108 | -1.06 | -0.494 | -- | -0.436 | 17 | 82 | 4054 | -- | -- |
| 220.17 | 0.691 | 3.36 | 0.359 | 0.0386 | -1.03 | -- | -1.69 | -0.396 | 19.5 | 81.06 | 4078 | -- | -- |
| 222.72 | 0.695 | 3.35 | 0.197 | 0.0234 | -1.11 | -- | -- | -0.443 | 19.8 | 82 | 4027 | -- | -- |
| 220.23 | 0.691 | 3.36 | 0.359 | -- | -1.03 | -- | -1.74 | -0.386 | -- | 81.34 | 4056 | -- | -- |
| 235.66 | 0.72 | 3.27 | 0.132 | 0.0152 | -- | -0.558 | -- | -0.0978 | 17 | -- | -- | -- | -- |
| 236.1 | 0.72 | 3.28 | 0.13 | 0.077 | -- | -- | -- | -0.101 | 22.3 | -- | -- | -- | -- |
| 222.73 | 0.695 | 3.36 | 0.202 | -- | -1.13 | -- | -- | -0.459 | -- | 81.69 | 4027 | -- | -- |
| 223.78 | 0.697 | 3.36 | -- | 0.0278 | -1.08 | -- | -- | -0.462 | 22.2 | 82 | 4027 | -- | -- |
| 236.46 | 0.719 | 3.27 | 0.131 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 236.55 | 0.719 | 3.28 | -- | 0.0777 | -- | -- | -- | -0.115 | 22.4 | -- | -- | -- | -- |
| 223.8 | 0.697 | 3.36 | -- | -- | -1.1 | -- | -- | -0.471 | -- | 82 | 4027 | -- | -- |
| 236.91 | 0.718 | 3.28 | -- | -- | -- | -- | -- | -0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 216.12 | humidity | 70 | 4320 | > th | dose dependent | rect. | 11 | 3 |
| 2 | 216.27 | humidity | 80 | 4320 | > th | dose independent | rect. | 11 | 10 |
| 4 | 216.40 | humidity | 80 | 4320 | < th | dose independent | rect. | 11 | 10 |
| 9 | 216.54 | humidity | 80 | 4320 | < th | dose independent | rect. | 11 | 8 |
| 25 | 217.15 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 28 | 217.18 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 32 | 217.26 | humidity | 80 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 43 | 217.40 | humidity | 70 | 4320 | > th | dose dependent | rect. | 10 | 11 |
| 47 | 217.48 | humidity | 80 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 52 | 217.54 | humidity | 80 | 4320 | > th | dose independent | sin | 20 | NA |
| 69 | 217.75 | humidity | 80 | 4320 | < th | dose independent | sin | 20 | NA |
| 75 | 217.83 | humidity | 80 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 86 | 217.90 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 19 | 10 |
| 95 | 217.99 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 1 | 4 |
| 105 | 218.07 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 3 | 11 |
| 116 | 218.17 | humidity | 80 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 151 | 218.44 | humidity | 70 | 4320 | > th | dose dependent | sin | 21 | NA |
| 186 | 218.65 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 21 | 8 |
| 193 | 218.67 | humidity | 80 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 220 | 218.82 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 2 | 11 |
| 225 | 218.84 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 267 | 218.98 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 24 | 11 |
| 357 | 219.28 | humidity | 80 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 502 | 219.69 | humidity | 70 | 4320 | > th | dose dependent | rect. | 15 | 4 |
| 523 | 219.75 | humidity | 80 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 594 | 219.94 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 17 | 12 |
| 673 | 220.13 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 695 | 220.18 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 705 | 220.21 | humidity | 90 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 873 | 220.54 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 3 | 7 |
| 884 | 220.56 | humidity | 70 | 4320 | > th | dose dependent | no | NA | NA |
| 892 | 220.57 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 3 | 7 |
| 896 | 220.58 | humidity | 80 | 4320 | > th | dose independent | rect. | 20 | 23 |
| 901 | 220.59 | humidity | 80 | 4320 | > th | dose independent | no | NA | NA |
| 913 | 220.61 | humidity | 80 | 4320 | < th | dose independent | rect. | 20 | 23 |
| 943 | 220.66 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 958 | 220.67 | humidity | 70 | 4320 | > th | dose dependent | rect. | 17 | 23 |
| 966 | 220.69 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 969 | 220.69 | humidity | 70 | 4320 | > th | dose dependent | rect. | 20 | 23 |