Os10g0397800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial carrier protein family protein.
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Os10g0397800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial carrier protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.95 | 0.458 | 10.4 | 2.76 | 1.24 | 3.38 | -0.456 | -18.8 | 0.383 | 20 | 2 | 1 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 100.09 | 0.469 | 10.6 | 1.5 | 1.23 | -- | -0.496 | -- | 0.388 | 19.9 | -- | -- | -- | -- |
| 100.82 | 0.47 | 10.6 | 1.51 | 1.23 | -- | -- | -- | 0.388 | 19.9 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 182.72 | 0.632 | 10.6 | 1.5 | -- | -- | -- | -- | 0.371 | -- | -- | -- | -- | -- |
| 160.95 | 0.593 | 10.6 | -- | 1.22 | -- | -- | -- | 0.219 | 20 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 241.86 | 0.726 | 10.6 | -- | -- | -- | -- | -- | 0.205 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.77 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 13 | 14 |
| 4 | 92.12 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 15 | 13 |
| 8 | 92.33 | temperature | 30 | 30 | < th | dose independent | rect. | 13 | 6 |
| 11 | 92.45 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 13 | 4 |
| 12 | 92.52 | temperature | 30 | 270 | < th | dose independent | rect. | 22 | 19 |
| 14 | 92.59 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 15 | 2 |
| 18 | 92.63 | temperature | 30 | 10 | < th | dose independent | rect. | 24 | 19 |
| 21 | 92.73 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 14 | 5 |
| 23 | 92.77 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 4 | 11 |
| 25 | 92.79 | temperature | 30 | 270 | < th | dose independent | rect. | 11 | 6 |
| 32 | 92.90 | radiation | 10 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 35 | 92.96 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 8 | 7 |
| 40 | 93.00 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 48 | 93.11 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 15 | 4 |
| 58 | 93.28 | temperature | 30 | 90 | < th | dose independent | rect. | 15 | 2 |
| 59 | 93.28 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 15 | 17 |
| 63 | 93.34 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 17 | 3 |
| 68 | 93.39 | temperature | 30 | 30 | < th | dose independent | rect. | 15 | 4 |
| 78 | 93.46 | temperature | 30 | 720 | > th | dose independent | rect. | 12 | 2 |
| 97 | 93.58 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 22 | 10 |
| 116 | 93.69 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 6 |
| 146 | 93.78 | radiation | 10 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 154 | 93.84 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 1 |
| 164 | 93.93 | temperature | 30 | 10 | < th | dose independent | rect. | 22 | 21 |
| 169 | 93.96 | radiation | 10 | 10 | < th | dose independent | rect. | 22 | 21 |
| 189 | 94.07 | atmosphere | 1000 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 192 | 94.08 | wind | 9 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 194 | 94.08 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 200 | 94.11 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 4 | 11 |
| 212 | 94.14 | atmosphere | 1000 | 270 | > th | dose dependent | rect. | 1 | 12 |
| 225 | 94.24 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 6 |
| 230 | 94.27 | radiation | 20 | 720 | > th | dose independent | rect. | 16 | 15 |
| 244 | 94.32 | radiation | 20 | 10 | < th | dose dependent | rect. | 22 | 21 |
| 256 | 94.36 | temperature | 30 | 10 | < th | dose independent | rect. | 2 | 17 |
| 270 | 94.40 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 17 | 4 |
| 281 | 94.44 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 15 | 13 |
| 285 | 94.46 | radiation | 10 | 10 | < th | dose independent | rect. | 22 | 19 |
| 297 | 94.49 | radiation | 20 | 720 | > th | dose independent | rect. | 16 | 1 |
| 349 | 94.57 | atmosphere | 995 | 10 | > th | dose independent | rect. | 24 | 19 |
| 351 | 94.58 | atmosphere | 995 | 270 | > th | dose independent | rect. | 22 | 19 |
| 357 | 94.60 | radiation | 20 | 10 | < th | dose independent | rect. | 12 | 7 |
| 358 | 94.60 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 12 |
| 360 | 94.61 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 4 | 20 |
| 378 | 94.65 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 6 | 9 |
| 381 | 94.67 | wind | 1 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 385 | 94.67 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 6 | 9 |
| 397 | 94.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 399 | 94.70 | atmosphere | 1000 | 10 | < th | dose independent | sin | 18 | NA |
| 403 | 94.70 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 10 | 21 |
| 432 | 94.74 | atmosphere | 1005 | 270 | > th | dose independent | sin | 16 | NA |
| 465 | 94.80 | radiation | 20 | 10 | < th | dose independent | rect. | 10 | 9 |
| 481 | 94.83 | atmosphere | 1010 | 720 | < th | dose independent | rect. | 22 | 3 |
| 486 | 94.83 | radiation | 10 | 10 | < th | dose independent | rect. | 7 | 12 |
| 508 | 94.85 | temperature | 30 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 520 | 94.86 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 1 | 14 |
| 521 | 94.87 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 523 | 94.87 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 10 | 14 |
| 527 | 94.87 | radiation | 10 | 10 | < th | dose independent | rect. | 22 | 23 |
| 545 | 94.89 | wind | 1 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 553 | 94.90 | temperature | 30 | 720 | < th | dose independent | rect. | 20 | 15 |
| 572 | 94.92 | humidity | 60 | 90 | > th | dose independent | rect. | 19 | 18 |
| 574 | 94.92 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 19 | 4 |
| 576 | 94.93 | wind | 1 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 597 | 94.95 | atmosphere | 1000 | 10 | > th | dose independent | no | NA | NA |
| 599 | 94.95 | atmosphere | 1000 | 10 | < th | dose independent | no | NA | NA |
| 607 | 94.95 | radiation | 10 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 610 | 94.95 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 2 | 10 |
| 615 | 94.96 | radiation | 10 | 10 | < th | dose independent | rect. | 7 | 10 |
| 620 | 94.96 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 13 | 23 |
| 621 | 94.96 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 19 | 23 |
| 623 | 94.96 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 6 |
| 646 | 94.97 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 15 | 23 |
| 647 | 94.97 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 21 | 23 |
| 648 | 94.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 1 |
| 652 | 94.97 | radiation | 20 | 10 | < th | dose dependent | rect. | 22 | 19 |
| 672 | 94.99 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 23 |
| 685 | 95.00 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 17 | 23 |
| 691 | 95.01 | humidity | 60 | 90 | > th | dose independent | rect. | 15 | 2 |
| 709 | 95.03 | wind | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 719 | 95.04 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 16 |
| 734 | 95.06 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 3 | 1 |
| 744 | 95.07 | humidity | 60 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 752 | 95.07 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 2 | 10 |
| 757 | 95.09 | temperature | 30 | 720 | > th | dose independent | sin | 7 | NA |
| 759 | 95.09 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 15 | 10 |
| 773 | 95.10 | radiation | 30 | 10 | < th | dose dependent | rect. | 9 | 10 |
| 826 | 95.13 | radiation | 40 | 10 | < th | dose dependent | rect. | 12 | 7 |
| 876 | 95.16 | temperature | 10 | 30 | > th | dose dependent | rect. | 22 | 10 |
| 905 | 95.20 | wind | 9 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 920 | 95.21 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 936 | 95.22 | humidity | 60 | 270 | > th | dose independent | rect. | 13 | 3 |
| 974 | 95.24 | radiation | 10 | 10 | < th | dose independent | rect. | 24 | 17 |
| 981 | 95.24 | humidity | 60 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 982 | 95.24 | atmosphere | 1010 | 720 | < th | dose dependent | rect. | 2 | 1 |