Os10g0395200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0395200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.37 | 0.421 | 13 | -2.05 | 1.17 | 1.39 | -0.00374 | -0.19 | -0.771 | 21.6 | 21.56 | 1652 | -- | -- |
| 80.38 | 0.418 | 13 | -2 | 1.17 | 1.39 | -0.0194 | -- | -0.757 | 21.6 | 21.47 | 1667 | -- | -- |
| 80.36 | 0.418 | 13 | -2.05 | 1.17 | 1.4 | -- | -0.182 | -0.769 | 21.6 | 21.52 | 1667 | -- | -- |
| 80.38 | 0.418 | 13 | -2 | 1.17 | 1.39 | -- | -- | -0.758 | 21.6 | 21.43 | 1667 | -- | -- |
| 115.11 | 0.5 | 12.9 | -1.74 | -- | 1.82 | -- | 1.1 | -0.72 | -- | 20.73 | 799 | -- | -- |
| 142.41 | 0.559 | 12.9 | -1.5 | 1.23 | -- | 0.00257 | -- | -0.439 | 21.5 | -- | -- | -- | -- |
| 142.41 | 0.559 | 12.9 | -1.5 | 1.23 | -- | -- | -- | -0.439 | 21.5 | -- | -- | -- | -- |
| 111.8 | 0.492 | 12.9 | -2.08 | -- | 2.08 | -- | -- | -0.789 | -- | 20.6 | 769 | -- | -- |
| 177.12 | 0.62 | 12.9 | -- | 0.989 | 1.15 | -- | -- | -0.516 | 21 | 21.24 | 954 | -- | -- |
| 231.12 | 0.71 | 12.9 | -1.49 | -- | -- | -- | -- | -0.442 | -- | -- | -- | -- | -- |
| 201.92 | 0.665 | 12.9 | -- | 1.22 | -- | -- | -- | -0.272 | 21.4 | -- | -- | -- | -- |
| 214.7 | 0.682 | 12.9 | -- | -- | 1.6 | -- | -- | -0.496 | -- | 22.1 | 734 | -- | -- |
| 289.99 | 0.795 | 12.8 | -- | -- | -- | -- | -- | -0.277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 2 | 80.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 3 | 80.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 4 | 80.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 5 | 80.57 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 9 | 80.71 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 15 | 81.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 19 | 81.44 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 25 | 81.53 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 21 |
| 41 | 81.71 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 51 | 81.76 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 52 | 81.76 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 16 |
| 54 | 81.76 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 63 | 81.80 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 88 | 81.87 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 121 | 81.98 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 143 | 82.07 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 193 | 82.34 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 215 | 82.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 223 | 82.54 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 231 | 82.57 | temperature | 20.0 | 270 | > th | dose dependent | no | NA | NA |
| 235 | 82.58 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 269 | 82.80 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 281 | 82.87 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 297 | 82.96 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 302 | 83.00 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 20 | 14 |
| 337 | 83.14 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 365 | 83.23 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 487 | 83.57 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 526 | 83.66 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 577 | 83.77 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 629 | 83.87 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 714 | 83.97 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 18 |
| 861 | 84.13 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 963 | 84.30 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 984 | 84.34 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 2 |