Os10g0394200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to SBT2 protein (Subtilisin-like protease).
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Os10g0394200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to SBT2 protein (Subtilisin-like protease).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 276.19 | 0.781 | 4.02 | 0.104 | 1.71 | 2.41 | 0.755 | 0.841 | 0.162 | 19.1 | 21.54 | 1324 | -- | -- |
| 268.47 | 0.763 | 4.03 | -0.121 | 1.15 | 2.92 | 0.0313 | -- | 0.112 | 18.3 | 22.84 | 912 | -- | -- |
| 267.96 | 0.762 | 4.03 | -0.219 | 1.09 | 3 | -- | -0.355 | 0.104 | 18.1 | 23 | 912 | -- | -- |
| 267.5 | 0.762 | 4 | -0.113 | 1.02 | 2.99 | -- | -- | 0.186 | 18.1 | 23.09 | 891 | -- | -- |
| 283.81 | 0.785 | 4 | -0.211 | -- | 3.55 | -- | -0.443 | 0.14 | -- | 23.37 | 708 | -- | -- |
| 482.33 | 1.03 | 3.92 | 0.718 | 1.65 | -- | 0.83 | -- | 0.652 | 19.8 | -- | -- | -- | -- |
| 484.29 | 1.03 | 3.92 | 0.698 | 1.65 | -- | -- | -- | 0.653 | 19.8 | -- | -- | -- | -- |
| 284.16 | 0.785 | 3.99 | -0.153 | -- | 3.51 | -- | -- | 0.145 | -- | 23.25 | 706 | -- | -- |
| 267.8 | 0.762 | 4 | -- | 1.02 | 2.97 | -- | -- | 0.207 | 18.1 | 23.14 | 888 | -- | -- |
| 632.2 | 1.17 | 3.88 | 0.677 | -- | -- | -- | -- | 0.63 | -- | -- | -- | -- | -- |
| 497.12 | 1.04 | 3.94 | -- | 1.65 | -- | -- | -- | 0.575 | 19.8 | -- | -- | -- | -- |
| 284.73 | 0.786 | 3.98 | -- | -- | 3.48 | -- | -- | 0.17 | -- | 23.29 | 703 | -- | -- |
| 644.29 | 1.18 | 3.9 | -- | -- | -- | -- | -- | 0.554 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 273.14 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 4 | 273.58 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 6 | 273.68 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 20 |
| 18 | 274.64 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 24 | 275.30 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 38 | 276.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 42 | 277.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 77 | 278.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 98 | 278.54 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 104 | 278.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 114 | 278.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 118 | 278.78 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 148 | 279.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 297 | 280.92 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 414 | 282.05 | temperature | 20 | 1440 | > th | dose dependent | sin | 6 | NA |
| 421 | 282.10 | temperature | 25 | 1440 | > th | dose dependent | sin | 1 | NA |
| 479 | 282.53 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 485 | 282.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 563 | 283.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 712 | 284.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 995 | 285.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 8 |