FiT-DB / Search/ Help/ Sample detail

Os10g0392500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.48 (0.0178) R2 : 0.758
β1 : -1.81 (0.0653) R2dD : 0.424 R2D : 0.288
β2 : 1.13 (0.0463) R2dC : 0.314 R2C : 0.247
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.605 (0.0381) R2dN8 : 0.179 R2N8 : 0.0347
σ : 0.335
deviance : 51.24
__
_____
C
peak time of C : 5.18
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
45.14 0.316 9.49 -1.86 1.26 -0.505 -0.414 1.01 -0.703 5.53 89.65 606 -- --
46.94 0.319 9.49 -1.77 1.28 -0.529 -0.0488 -- -0.694 5.57 89.18 605 -- --
45.5 0.314 9.49 -1.86 1.25 -0.522 -- 0.862 -0.704 5.55 89.77 618 -- --
46.94 0.319 9.49 -1.77 1.28 -0.539 -- -- -0.693 5.58 89.34 605 -- --
101.86 0.473 9.48 -1.81 -- 0.495 -- 0.0817 -0.524 -- 75.42 1256 -- --
51.07 0.335 9.48 -1.81 1.13 -- -0.257 -- -0.606 5.16 -- -- -- --
51.24 0.335 9.48 -1.81 1.13 -- -- -- -0.605 5.18 -- -- -- --
101.44 0.471 9.48 -1.79 -- 0.504 -- -- -0.533 -- 70.99 1267 -- --
126.08 0.523 9.46 -- 1.24 -0.864 -- -- -0.585 5.37 85 1994 -- --
117.48 0.506 9.49 -1.77 -- -- -- -- -0.576 -- -- -- -- --
137.75 0.549 9.43 -- 1.09 -- -- -- -0.403 5.24 -- -- -- --
182.86 0.63 9.48 -- -- -1.03 -- -- -0.545 -- 84 1253 -- --
200.32 0.661 9.44 -- -- -- -- -- -0.38 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.54 temperature 30.0 720 > th dose independent rect. 11 3
3 44.76 temperature 30.0 720 > th dose independent rect. 13 1
4 44.78 humidity 90.0 720 > th dose independent rect. 5 21
5 44.79 temperature 30.0 720 > th dose independent rect. 18 20
22 44.93 humidity 90.0 720 > th dose dependent rect. 5 21
24 45.02 humidity 90.0 720 > th dose dependent rect. 7 19
25 45.03 temperature 30.0 720 < th dose independent rect. 8 7
35 45.24 atmosphere 995.0 30 > th dose dependent rect. 16 12
48 45.43 humidity 90.0 720 > th dose independent rect. 21 21
50 45.45 precipitation 0.1 720 > th dose independent rect. 1 17
51 45.46 precipitation 0.1 720 > th dose independent rect. 20 22
58 45.49 humidity 90.0 720 > th dose dependent sin 22 NA
71 45.56 precipitation 0.1 720 > th dose dependent rect. 1 17
77 45.58 temperature 25.0 10 > th dose dependent rect. 16 12
79 45.59 atmosphere 995.0 30 > th dose dependent rect. 16 10
89 45.62 temperature 25.0 10 > th dose dependent rect. 16 14
105 45.68 humidity 90.0 720 > th dose dependent rect. 7 23
119 45.74 humidity 90.0 720 > th dose dependent rect. 1 23
120 45.75 humidity 90.0 720 > th dose independent rect. 17 23
121 45.75 precipitation 0.1 720 > th dose dependent sin 2 NA
123 45.76 precipitation 0.1 1440 > th dose independent rect. 2 1
125 45.76 precipitation 0.1 1440 > th dose dependent rect. 2 1
132 45.78 humidity 90.0 720 > th dose dependent rect. 20 23
139 45.80 humidity 90.0 720 < th dose independent rect. 4 20
140 45.80 temperature 30.0 720 < th dose independent rect. 8 23
144 45.81 humidity 90.0 720 < th dose independent rect. 6 18
147 45.82 humidity 90.0 720 > th dose independent no NA NA
150 45.82 humidity 90.0 720 > th dose independent rect. 15 23
151 45.82 humidity 90.0 720 > th dose dependent no NA NA
163 45.84 humidity 90.0 720 > th dose dependent rect. 13 23
167 45.85 humidity 90.0 720 > th dose independent rect. 13 23
170 45.85 atmosphere 995.0 10 > th dose dependent sin 16 NA
177 45.86 humidity 80.0 1440 > th dose dependent rect. 9 5
189 45.88 atmosphere 1010.0 90 < th dose dependent rect. 13 10
197 45.90 atmosphere 1010.0 90 < th dose dependent rect. 13 12
208 45.91 humidity 90.0 720 > th dose dependent rect. 15 23
211 45.92 atmosphere 1015.0 10 < th dose dependent sin 16 NA
216 45.92 humidity 90.0 720 > th dose dependent rect. 10 23
222 45.93 humidity 90.0 720 > th dose independent rect. 8 23
223 45.93 humidity 90.0 720 > th dose independent rect. 24 23
228 45.94 humidity 70.0 1440 < th dose independent rect. 16 1
236 45.95 temperature 30.0 720 < th dose independent rect. 3 17
249 45.98 temperature 15.0 4320 > th dose independent rect. 7 1
265 46.00 atmosphere 1010.0 10 < th dose dependent rect. 12 12
274 46.02 precipitation 0.1 720 > th dose independent sin 2 NA
294 46.05 atmosphere 995.0 720 > th dose independent rect. 5 14
313 46.08 humidity 60.0 43200 < th dose dependent rect. 22 10
325 46.11 atmosphere 1010.0 10 < th dose dependent rect. 14 10
332 46.12 temperature 15.0 720 > th dose independent rect. 17 23
333 46.12 humidity 60.0 43200 < th dose dependent rect. 3 5
360 46.15 precipitation 0.1 720 > th dose independent rect. 17 23
365 46.16 humidity 90.0 720 > th dose independent rect. 21 5
384 46.18 precipitation 0.1 720 < th dose independent sin 1 NA
388 46.18 precipitation 0.1 720 < th dose dependent sin 1 NA
399 46.20 atmosphere 995.0 720 > th dose dependent rect. 16 1
437 46.26 precipitation 0.1 720 > th dose independent no NA NA
438 46.26 precipitation 0.1 720 < th dose independent no NA NA
439 46.26 wind 1.0 1440 > th dose independent rect. 1 1
440 46.26 atmosphere 995.0 720 > th dose independent rect. 7 10
442 46.26 temperature 15.0 720 > th dose independent rect. 4 18
445 46.26 precipitation 0.1 720 > th dose independent rect. 9 23
446 46.26 precipitation 0.1 720 > th dose independent rect. 12 23
447 46.26 precipitation 0.1 720 < th dose dependent no NA NA
452 46.27 temperature 30.0 720 < th dose independent rect. 1 23
454 46.27 precipitation 0.1 720 > th dose independent rect. 5 23
468 46.29 temperature 30.0 720 < th dose independent sin 0 NA
469 46.29 temperature 15.0 1440 > th dose independent rect. 19 10
474 46.29 temperature 30.0 720 < th dose independent rect. 6 23
481 46.30 temperature 15.0 720 > th dose independent rect. 8 7
489 46.31 temperature 15.0 270 > th dose independent rect. 9 22
492 46.31 precipitation 0.1 720 > th dose independent rect. 14 23
500 46.32 humidity 90.0 720 > th dose independent rect. 1 1
525 46.34 temperature 15.0 1440 > th dose independent rect. 19 12
528 46.34 temperature 20.0 720 < th dose dependent rect. 6 11
532 46.35 wind 1.0 1440 < th dose independent rect. 1 1
560 46.36 humidity 60.0 43200 > th dose independent rect. 23 8
565 46.36 humidity 90.0 720 < th dose independent rect. 17 23
573 46.37 temperature 30.0 720 < th dose independent rect. 10 23
589 46.39 temperature 30.0 720 > th dose independent sin 7 NA
603 46.40 atmosphere 995.0 1440 > th dose independent rect. 17 1
629 46.42 humidity 90.0 720 < th dose independent rect. 21 1
631 46.42 temperature 15.0 720 > th dose independent rect. 17 14
641 46.43 humidity 50.0 43200 < th dose dependent rect. 7 1
651 46.45 humidity 50.0 43200 < th dose independent rect. 4 4
657 46.46 humidity 90.0 720 > th dose independent sin 0 NA
674 46.47 temperature 15.0 1440 > th dose independent rect. 17 12
676 46.47 temperature 15.0 1440 > th dose independent rect. 19 18
686 46.48 humidity 90.0 1440 < th dose independent rect. 9 5
699 46.49 temperature 15.0 720 > th dose independent rect. 4 16
713 46.50 humidity 90.0 720 > th dose independent rect. 5 13
715 46.50 humidity 90.0 720 < th dose independent rect. 19 21
733 46.52 temperature 15.0 1440 > th dose independent rect. 21 10
737 46.52 temperature 15.0 1440 > th dose independent rect. 17 20
738 46.52 temperature 15.0 1440 > th dose independent rect. 19 20
742 46.52 humidity 90.0 720 > th dose dependent sin 14 NA
747 46.52 humidity 50.0 43200 < th dose dependent rect. 20 13
753 46.53 radiation 1.0 1440 < th dose independent rect. 9 3
758 46.53 wind 9.0 43200 > th dose dependent rect. 17 1
759 46.53 radiation 1.0 1440 < th dose dependent rect. 9 3
770 46.53 precipitation 0.1 720 > th dose dependent rect. 17 23
772 46.54 precipitation 0.1 1440 < th dose independent rect. 7 1
777 46.54 atmosphere 995.0 720 > th dose independent rect. 5 23
780 46.54 precipitation 0.1 1440 < th dose dependent rect. 7 1
789 46.55 temperature 15.0 1440 > th dose independent rect. 21 8
797 46.55 atmosphere 1000.0 30 > th dose independent rect. 17 23
810 46.56 wind 1.0 1440 > th dose independent rect. 1 5
840 46.56 precipitation 0.1 720 > th dose dependent rect. 9 23
842 46.57 atmosphere 995.0 720 > th dose independent rect. 9 8
851 46.57 precipitation 0.1 720 > th dose dependent no NA NA
865 46.57 precipitation 0.1 720 > th dose dependent rect. 12 23
867 46.58 radiation 1.0 1440 > th dose independent rect. 9 3
869 46.58 temperature 15.0 1440 > th dose independent rect. 19 16
871 46.58 humidity 90.0 720 < th dose independent rect. 19 23
872 46.58 temperature 20.0 720 < th dose dependent sin 0 NA
882 46.59 precipitation 0.1 720 > th dose dependent rect. 1 3
883 46.59 humidity 70.0 30 > th dose dependent rect. 7 6
885 46.60 humidity 60.0 43200 > th dose independent rect. 23 6
900 46.61 precipitation 0.1 720 > th dose independent rect. 1 3
924 46.62 temperature 20.0 1440 < th dose dependent rect. 7 5
931 46.62 atmosphere 1015.0 30 < th dose dependent rect. 12 19
934 46.63 atmosphere 1015.0 1440 < th dose independent rect. 3 7
936 46.63 temperature 15.0 1440 > th dose independent rect. 21 16
947 46.64 humidity 60.0 43200 > th dose independent rect. 24 2
950 46.64 temperature 15.0 1440 > th dose independent rect. 23 8
965 46.65 humidity 90.0 1440 > th dose independent rect. 9 5
970 46.65 humidity 90.0 720 < th dose independent rect. 8 23
978 46.65 precipitation 0.1 720 > th dose dependent rect. 6 23
995 46.67 temperature 15.0 1440 > th dose independent rect. 21 18
998 46.67 atmosphere 995.0 720 > th dose independent rect. 20 23