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Os10g0392400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ZIM domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.23 (0.059) R2 : 0.385
β1 : 1.33 (0.23) R2dD : 0.056 R2D : -0.0946
β2 : 1.23 (0.138) R2dC : 0.11 R2C : 0.101
β3 : 2.94 (0.257) R2dE : 0.238 R2E : 0.0251
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.39 (0.135) R2dN8 : 0.23 R2N8 : 0.0117
σ : 1.08
deviance : 534.45
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_____
C
peak time of C : 0.553
E
wheather : radiation
threshold : 1.01
memory length : 4797
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 18
open length of G : 1.54

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
537.3 1.09 8.22 1.15 1.36 2.92 -0.196 -1.16 1.36 0.554 1.009 4626 18 1.05
534.6 1.08 8.22 1.3 1.23 2.93 -0.139 -- 1.39 0.641 1.009 4797 18 1.08
533.64 1.08 8.22 1.2 1.24 2.85 -- -0.963 1.39 0.548 1.01 4797 18 1.42
534.45 1.08 8.23 1.33 1.23 2.94 -- -- 1.39 0.553 1.01 4797 18 1.54
627.25 1.17 8.22 1.33 -- 3.09 -- -0.91 1.43 -- 1.008 4919 18 1.41
687.5 1.23 8.38 0.285 1.46 -- -0.226 -- 0.753 0.311 -- -- -- --
687.72 1.23 8.38 0.294 1.46 -- -- -- 0.754 0.324 -- -- -- --
622.05 1.16 8.22 1.44 -- 3.06 -- -- 1.42 -- 1.01 5101 18 1.37
575.54 1.12 8.23 -- 1.27 2.41 -- -- 1.21 0.56 1 4883 18 1.73
821.4 1.34 8.35 0.342 -- -- -- -- 0.777 -- -- -- -- --
689.99 1.23 8.38 -- 1.46 -- -- -- 0.722 0.335 -- -- -- --
667.26 1.2 8.26 -- -- 2.55 -- -- 1.16 -- 1 5106 18 1.23
824.49 1.34 8.36 -- -- -- -- -- 0.739 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 545.50 radiation 30 14400 < th dose dependent rect. 21 8
2 546.14 wind 3 43200 < th dose dependent rect. 11 1
6 548.98 radiation 1 14400 > th dose independent rect. 18 1
16 549.77 wind 3 43200 < th dose independent rect. 11 3
18 550.42 wind 3 43200 < th dose independent rect. 12 1
20 550.54 wind 3 43200 > th dose independent rect. 12 2
21 550.75 radiation 1 4320 < th dose dependent rect. 2 3
33 551.43 radiation 1 4320 < th dose dependent rect. 4 1
34 551.94 radiation 1 14400 < th dose dependent rect. 21 8
37 552.35 radiation 1 4320 > th dose independent rect. 18 12
40 553.06 radiation 1 14400 < th dose dependent rect. 19 10
48 555.87 radiation 1 4320 < th dose dependent rect. 18 12
49 555.92 radiation 1 14400 < th dose independent rect. 18 9
56 556.30 radiation 1 14400 < th dose independent rect. 18 2
77 557.24 wind 1 43200 > th dose independent rect. 2 1
88 558.50 radiation 20 14400 < th dose dependent rect. 19 10
95 559.74 radiation 1 14400 < th dose dependent rect. 18 8
101 560.17 radiation 1 14400 < th dose dependent rect. 18 2
105 560.22 radiation 1 14400 < th dose dependent rect. 18 4
125 561.45 atmosphere 1015 43200 < th dose independent rect. 18 1
131 561.76 radiation 30 14400 < th dose independent rect. 18 13
151 562.57 radiation 30 14400 < th dose independent rect. 5 2
153 562.58 radiation 30 14400 < th dose independent rect. 3 4
157 562.84 atmosphere 1015 43200 > th dose independent rect. 15 1
169 562.95 temperature 20 1440 > th dose dependent rect. 17 5
199 564.03 temperature 20 720 > th dose dependent rect. 16 21
206 564.32 atmosphere 1015 43200 > th dose dependent rect. 1 1
217 564.72 radiation 20 14400 > th dose dependent rect. 6 1
256 565.36 radiation 20 14400 > th dose independent rect. 6 1
271 565.40 humidity 90 14400 > th dose dependent rect. 24 9
273 565.49 humidity 90 14400 > th dose dependent rect. 3 5
305 565.75 wind 1 43200 < th dose independent rect. 2 1
306 565.75 humidity 90 14400 > th dose independent rect. 23 9
339 566.26 radiation 30 14400 < th dose independent rect. 20 11
341 566.26 temperature 20 720 > th dose dependent rect. 19 18
357 566.66 wind 3 43200 < th dose dependent rect. 20 1
374 567.04 radiation 30 14400 < th dose independent rect. 22 9
389 567.31 wind 1 43200 > th dose dependent rect. 11 6
393 567.39 wind 1 43200 > th dose dependent rect. 12 4
398 567.47 humidity 90 14400 > th dose independent rect. 22 6
402 567.56 atmosphere 1015 43200 < th dose independent rect. 11 3
403 567.59 atmosphere 1015 43200 > th dose independent rect. 11 2
410 567.70 atmosphere 1015 43200 < th dose independent rect. 10 5
415 567.73 radiation 30 14400 > th dose dependent rect. 16 16
425 567.85 atmosphere 1015 43200 > th dose independent rect. 10 5
428 567.86 radiation 1 14400 < th dose dependent sin 12 NA
453 568.00 atmosphere 1005 43200 < th dose independent rect. 22 1
462 568.11 humidity 90 14400 > th dose dependent rect. 24 1
467 568.23 wind 1 43200 > th dose independent rect. 24 1
468 568.23 humidity 90 14400 > th dose dependent rect. 24 14
478 568.42 atmosphere 1015 43200 > th dose dependent rect. 19 1
479 568.43 radiation 1 14400 < th dose dependent rect. 7 7
501 568.69 atmosphere 1005 43200 > th dose independent rect. 24 2
510 568.83 radiation 1 14400 < th dose dependent rect. 18 20
512 568.87 wind 5 43200 < th dose independent rect. 15 1
513 568.87 atmosphere 1005 43200 < th dose independent rect. 1 1
517 568.92 humidity 90 14400 > th dose dependent sin 8 NA
542 569.28 atmosphere 1005 43200 < th dose independent rect. 22 4
546 569.31 humidity 90 14400 > th dose dependent rect. 5 1
559 569.51 atmosphere 1005 43200 < th dose independent rect. 21 8
561 569.52 wind 5 43200 > th dose independent rect. 15 1
562 569.53 atmosphere 1005 43200 < th dose independent rect. 19 10
581 569.65 atmosphere 1005 43200 < th dose independent rect. 4 1
599 569.75 atmosphere 1005 43200 < th dose independent rect. 19 7
636 570.04 atmosphere 1015 43200 < th dose independent rect. 3 1
663 570.29 atmosphere 1005 43200 < th dose independent rect. 19 4
671 570.36 atmosphere 1015 43200 < th dose independent rect. 13 1
673 570.37 wind 5 43200 < th dose dependent rect. 10 12
674 570.38 humidity 90 14400 > th dose dependent rect. 17 13
700 570.54 atmosphere 1005 43200 < th dose independent rect. 10 2
718 570.70 radiation 30 14400 > th dose independent rect. 16 16
730 570.76 atmosphere 1005 43200 < th dose independent rect. 19 17
736 570.79 wind 3 43200 > th dose dependent rect. 15 1
740 570.81 humidity 90 14400 > th dose dependent rect. 13 17
741 570.82 atmosphere 1005 43200 < th dose independent rect. 19 19
750 570.87 humidity 90 14400 > th dose dependent rect. 23 4
758 570.90 humidity 90 14400 > th dose dependent rect. 22 6
764 570.92 atmosphere 1005 43200 > th dose independent rect. 24 4
791 570.97 atmosphere 1005 43200 < th dose independent rect. 19 2
813 571.12 humidity 90 14400 > th dose independent rect. 23 1
821 571.17 radiation 1 14400 < th dose dependent rect. 13 18
846 571.29 wind 3 43200 > th dose independent rect. 9 13
868 571.39 atmosphere 1005 43200 < th dose independent sin 9 NA
888 571.45 atmosphere 1005 43200 > th dose independent rect. 10 2
919 571.56 radiation 1 14400 < th dose dependent rect. 11 20
930 571.65 atmosphere 1015 43200 > th dose independent rect. 1 4
936 571.67 atmosphere 1015 43200 > th dose dependent rect. 14 1
947 571.73 atmosphere 1005 43200 > th dose independent rect. 22 7