Os10g0391500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0391500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.93 | 0.355 | 9.32 | -1.49 | 0.73 | -0.658 | 0.292 | -1.61 | -0.204 | 1.34 | 25.11 | 20 | -- | -- |
| 60.23 | 0.364 | 9.34 | -1.74 | 0.703 | -0.522 | -0.263 | -- | -0.253 | 1.28 | 25.11 | 20 | -- | -- |
| 57.12 | 0.355 | 9.32 | -1.53 | 0.726 | -0.633 | -- | -1.38 | -0.211 | 1.3 | 25.1 | 19 | -- | -- |
| 60.51 | 0.365 | 9.34 | -1.73 | 0.703 | -0.522 | -- | -- | -0.251 | 1.28 | 25.1 | 19 | -- | -- |
| 80.65 | 0.418 | 9.35 | -1.53 | -- | -0.468 | -- | -0.257 | -0.248 | -- | 26.6 | 904 | -- | -- |
| 64.32 | 0.376 | 9.32 | -1.62 | 0.595 | -- | -0.268 | -- | -0.149 | 1.26 | -- | -- | -- | -- |
| 64.61 | 0.376 | 9.32 | -1.61 | 0.596 | -- | -- | -- | -0.148 | 1.27 | -- | -- | -- | -- |
| 79.25 | 0.415 | 9.34 | -1.78 | -- | -0.671 | -- | -- | -0.28 | -- | 28.98 | 979 | -- | -- |
| 86.13 | 0.432 | 9.2 | -- | 0.613 | 1.1 | -- | -- | 0.36 | 1.24 | 262.9 | 47520 | -- | -- |
| 86.52 | 0.435 | 9.31 | -1.59 | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
| 132.79 | 0.539 | 9.28 | -- | 0.568 | -- | -- | -- | 0.0316 | 1.17 | -- | -- | -- | -- |
| 109.31 | 0.487 | 9.2 | -- | -- | 1.06 | -- | -- | 0.358 | -- | 286 | 47520 | -- | -- |
| 152.8 | 0.577 | 9.27 | -- | -- | -- | -- | -- | 0.0406 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.45 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 20 |
| 19 | 56.70 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 23 |
| 55 | 56.93 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 56 | 56.94 | temperature | 30 | 90 | < th | dose dependent | rect. | 20 | 11 |
| 57 | 56.98 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 65 | 57.00 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 66 | 57.01 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 71 | 57.04 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 72 | 57.04 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 77 | 57.05 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 125 | 57.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 136 | 57.44 | temperature | 20 | 90 | > th | dose dependent | sin | 9 | NA |
| 190 | 57.60 | temperature | 30 | 90 | < th | dose dependent | sin | 9 | NA |
| 219 | 57.69 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 225 | 57.71 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 329 | 57.78 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 333 | 57.79 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 360 | 57.84 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 370 | 57.86 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 387 | 57.89 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 449 | 57.96 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 14 |
| 485 | 58.02 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 7 |
| 509 | 58.07 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 540 | 58.12 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 583 | 58.18 | temperature | 20 | 30 | < th | dose independent | rect. | 19 | 12 |
| 677 | 58.28 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 18 |
| 724 | 58.35 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 737 | 58.36 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 753 | 58.38 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 787 | 58.42 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 23 |
| 832 | 58.47 | temperature | 20 | 30 | < th | dose independent | sin | 10 | NA |
| 834 | 58.47 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 11 |
| 855 | 58.49 | temperature | 20 | 30 | > th | dose independent | sin | 10 | NA |
| 949 | 58.59 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |