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Os10g0391400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ZIM domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.08 (0.06) R2 : 0.332
β1 : -1.93 (0.22) R2dD : 0.118 R2D : 0.121
β2 : 2.33 (0.292) R2dC : 0.332 R2C : -0.0531
β3 : 1.78 (0.338) R2dE : 0.145 R2E : -0.267
β4 : -5.79 (1.13) R2dD*C : 0.1 R2D*C : -0.0865
β5 : -7.23 (1.33) R2dD*E : 0.112 R2D*E : -0.061
γ1 : 0.901 (0.129) R2dN8 : 0.0985 R2N8 : 0.0804
σ : 1.12
deviance : 572.5
__
_____
C
peak time of C : 18.7
E
wheather : radiation
threshold : 9.98
memory length : 785
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
572.5 1.12 7.08 -1.93 2.33 1.78 -5.79 -7.23 0.901 18.7 9.98 785 -- --
637.1 1.18 7.04 -1.77 0.975 0.316 -0.943 -- 0.757 18.5 9.944 820 -- --
599.32 1.14 7.05 -1.96 1.7 1.88 -- -3.87 0.954 20.5 9.83 1146 -- --
605.87 1.15 7.04 -1.84 1.76 1.66 -- -- 0.927 20.2 9.901 1101 -- --
674.18 1.21 7.03 -1.97 -- 1.64 -- -3.82 1.11 -- 9.75 5952 -- --
640.89 1.19 7.04 -1.76 1.05 -- -1.08 -- 0.777 19.6 -- -- -- --
644.19 1.19 7.04 -1.73 1.05 -- -- -- 0.775 19.6 -- -- -- --
679.91 1.21 6.95 -2.22 -- 1.6 -- -- 1.17 -- 9.99 5897 -- --
666.9 1.2 7.01 -- 2.04 1.64 -- -- 1.17 19.9 14.13 960 -- --
703.68 1.24 7.02 -1.75 -- -- -- -- 0.759 -- -- -- -- --
723.43 1.26 7 -- 1.07 -- -- -- 0.968 19.5 -- -- -- --
731.49 1.26 6.94 -- -- 1.31 -- -- 1.17 -- 10.01 47520 -- --
784.35 1.31 6.97 -- -- -- -- -- 0.953 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 564.08 radiation 1 4320 < th dose dependent rect. 24 6
3 564.26 radiation 1 4320 < th dose dependent rect. 19 11
4 564.27 radiation 1 4320 < th dose dependent rect. 21 9
6 564.30 radiation 1 4320 < th dose dependent rect. 4 2
14 568.92 radiation 10 720 < th dose independent rect. 8 10
18 570.19 wind 7 30 > th dose dependent sin 10 NA
22 571.36 radiation 1 4320 > th dose independent rect. 18 12
24 572.32 wind 7 90 > th dose independent sin 10 NA
26 572.50 wind 7 90 < th dose independent sin 10 NA
27 572.77 radiation 20 4320 < th dose independent rect. 17 8
28 572.91 radiation 10 720 < th dose independent rect. 9 18
29 573.32 radiation 1 4320 < th dose independent rect. 5 1
30 573.57 radiation 1 4320 > th dose independent rect. 5 1
46 574.55 radiation 20 4320 < th dose independent rect. 17 4
47 574.60 radiation 20 4320 < th dose independent rect. 17 11
50 574.89 radiation 10 720 < th dose independent rect. 24 23
53 574.94 radiation 10 720 < th dose independent rect. 9 22
54 574.98 radiation 20 4320 < th dose independent rect. 17 2
55 575.03 radiation 1 4320 < th dose independent rect. 18 12
56 575.22 radiation 10 720 < th dose independent sin 0 NA
73 576.44 radiation 10 720 < th dose independent rect. 20 22
76 576.70 radiation 10 720 < th dose independent rect. 6 22
93 577.76 radiation 10 720 < th dose independent rect. 9 14
95 577.85 radiation 10 720 < th dose independent rect. 24 18
101 578.04 wind 5 90 > th dose dependent rect. 17 18
102 578.20 wind 7 90 > th dose independent rect. 17 18
119 578.79 wind 1 43200 > th dose independent rect. 2 1
121 578.82 radiation 10 720 < th dose independent rect. 12 23
142 580.00 radiation 10 720 < th dose independent no NA NA
143 580.00 wind 9 720 > th dose dependent rect. 19 18
149 580.38 radiation 1 4320 < th dose independent rect. 24 6
153 580.47 wind 9 720 > th dose dependent rect. 20 21
161 580.64 radiation 1 4320 < th dose independent rect. 21 9
181 580.78 wind 9 720 < th dose independent sin 8 NA
184 580.81 radiation 10 720 < th dose independent rect. 16 23
210 581.21 radiation 10 1440 < th dose independent rect. 9 2
211 581.22 atmosphere 1010 14400 < th dose independent rect. 12 1
234 581.59 wind 9 720 > th dose dependent rect. 1 16
239 581.64 atmosphere 1010 14400 > th dose independent rect. 12 1
241 581.76 humidity 90 43200 < th dose independent rect. 5 6
242 581.77 wind 9 720 > th dose independent rect. 19 18
245 581.80 wind 9 720 > th dose dependent rect. 9 8
253 581.83 wind 3 43200 < th dose independent rect. 12 1
257 581.91 wind 1 43200 < th dose independent rect. 2 1
259 581.92 radiation 30 14400 > th dose dependent rect. 7 1
274 581.93 wind 9 720 > th dose independent sin 8 NA
275 581.95 radiation 10 720 < th dose independent rect. 12 20
278 582.01 atmosphere 1010 14400 < th dose independent rect. 17 1
281 582.10 atmosphere 1010 14400 < th dose independent rect. 16 4
282 582.11 wind 9 720 > th dose dependent sin 7 NA
294 582.27 atmosphere 1010 14400 < th dose independent rect. 12 8
302 582.34 wind 9 720 > th dose independent rect. 20 21
304 582.40 atmosphere 1010 14400 > th dose independent rect. 16 4
306 582.42 humidity 90 43200 > th dose independent rect. 8 1
322 582.53 atmosphere 1010 14400 < th dose independent rect. 19 1
326 582.54 atmosphere 1010 14400 > th dose independent rect. 12 8
329 582.55 humidity 90 43200 > th dose independent rect. 5 6
352 582.73 atmosphere 1010 14400 > th dose independent rect. 19 1
377 582.94 wind 3 43200 > th dose independent rect. 12 2
392 583.06 wind 5 43200 < th dose dependent rect. 12 2
423 583.18 radiation 10 720 < th dose independent rect. 12 15
424 583.19 humidity 90 14400 > th dose independent rect. 23 4
431 583.26 humidity 90 43200 > th dose independent rect. 5 10
434 583.28 humidity 90 43200 < th dose independent rect. 8 1
446 583.34 humidity 90 43200 < th dose independent sin 1 NA
451 583.35 humidity 90 14400 < th dose independent rect. 23 4
456 583.37 radiation 40 14400 < th dose independent rect. 17 15
459 583.39 radiation 40 14400 < th dose independent rect. 7 1
471 583.45 wind 9 720 > th dose independent rect. 15 2
490 583.53 humidity 50 43200 < th dose independent rect. 18 14
514 583.60 humidity 90 43200 > th dose dependent rect. 4 13
515 583.61 radiation 40 14400 < th dose independent rect. 2 6
519 583.62 wind 9 720 > th dose independent rect. 1 16
529 583.67 atmosphere 1010 14400 > th dose independent rect. 12 4
540 583.70 radiation 40 14400 < th dose independent rect. 22 10
541 583.70 radiation 40 14400 < th dose independent rect. 20 12
545 583.71 humidity 90 43200 > th dose dependent rect. 5 10
548 583.72 wind 7 90 > th dose independent rect. 17 11
556 583.74 humidity 90 43200 > th dose dependent rect. 8 1
558 583.75 atmosphere 1010 14400 > th dose independent sin 18 NA
568 583.78 humidity 90 43200 > th dose dependent rect. 5 7
601 583.88 atmosphere 1010 14400 < th dose independent sin 19 NA
618 583.94 wind 9 720 > th dose independent rect. 9 8
696 584.19 wind 9 720 > th dose independent rect. 11 6
701 584.20 humidity 90 14400 < th dose independent rect. 22 6
718 584.25 humidity 90 43200 > th dose independent sin 1 NA
721 584.25 radiation 10 720 < th dose independent rect. 12 6
744 584.31 atmosphere 1010 14400 > th dose dependent rect. 20 1
786 584.41 atmosphere 1010 14400 > th dose dependent rect. 12 1
793 584.43 atmosphere 1010 14400 > th dose dependent rect. 19 4
796 584.43 wind 9 720 > th dose dependent rect. 16 21
803 584.45 humidity 50 43200 > th dose independent rect. 18 15
818 584.47 atmosphere 1010 14400 > th dose dependent rect. 12 12
862 584.55 humidity 90 43200 > th dose dependent sin 1 NA
863 584.55 atmosphere 1010 43200 < th dose dependent rect. 19 1
892 584.63 wind 9 720 < th dose independent rect. 23 16
895 584.63 wind 7 90 > th dose dependent rect. 17 12
991 584.81 humidity 50 43200 > th dose independent rect. 23 10