Os10g0391300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DNA-binding SAP domain containing protein.
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Os10g0391300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DNA-binding SAP domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.73 | 0.417 | 3.53 | -0.459 | 0.518 | 0.559 | -1.38 | -0.462 | 0.0786 | 5.23 | 1013 | 6059 | -- | -- |
| 78.82 | 0.414 | 3.55 | -0.505 | 0.524 | 0.705 | -1.39 | -- | 0.0538 | 5.22 | 1015 | 5920 | -- | -- |
| 83.45 | 0.425 | 3.53 | -0.478 | 0.509 | 0.545 | -- | -0.394 | 0.0787 | 5.19 | 1013 | 6138 | -- | -- |
| 83.71 | 0.426 | 3.55 | -0.52 | 0.516 | 0.682 | -- | -- | 0.0579 | 5.15 | 1015 | 5919 | -- | -- |
| 96.89 | 0.458 | 3.54 | -0.447 | -- | 0.519 | -- | -0.379 | 0.0935 | -- | 1013 | 6380 | -- | -- |
| 89.18 | 0.443 | 3.57 | -0.775 | 0.504 | -- | -1.27 | -- | -0.0587 | 5.19 | -- | -- | -- | -- |
| 93.23 | 0.452 | 3.57 | -0.775 | 0.496 | -- | -- | -- | -0.0528 | 5.17 | -- | -- | -- | -- |
| 97.28 | 0.459 | 3.55 | -0.478 | -- | 0.566 | -- | -- | 0.0789 | -- | 1015 | 7123 | -- | -- |
| 88.36 | 0.438 | 3.52 | -- | 0.503 | 0.899 | -- | -- | 0.146 | 5.19 | 1015 | 6482 | -- | -- |
| 106.12 | 0.481 | 3.57 | -0.758 | -- | -- | -- | -- | -0.0403 | -- | -- | -- | -- | -- |
| 109.07 | 0.489 | 3.55 | -- | 0.483 | -- | -- | -- | 0.0335 | 5.23 | -- | -- | -- | -- |
| 101.27 | 0.469 | 3.53 | -- | -- | 0.814 | -- | -- | 0.155 | -- | 1015 | 7235 | -- | -- |
| 121.26 | 0.514 | 3.55 | -- | -- | -- | -- | -- | 0.0438 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.18 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 4 | 77.38 | humidity | 50 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 7 | 77.85 | wind | 9 | 30 | < th | dose independent | rect. | 3 | 23 |
| 8 | 78.05 | humidity | 50 | 14400 | < th | dose dependent | rect. | 12 | 6 |
| 26 | 78.10 | humidity | 50 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 27 | 78.10 | humidity | 50 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 30 | 78.21 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 36 | 78.33 | humidity | 50 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 38 | 78.37 | humidity | 50 | 14400 | < th | dose dependent | sin | 19 | NA |
| 56 | 78.37 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 78 | 78.41 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 203 | 78.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 287 | 78.94 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 292 | 79.00 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 310 | 79.01 | atmosphere | 1010 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 348 | 79.14 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 386 | 79.25 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 412 | 79.33 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 421 | 79.39 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 24 | 16 |
| 443 | 79.45 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 8 | 8 |
| 449 | 79.46 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 24 | 10 |
| 473 | 79.49 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 485 | 79.49 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 8 | 20 |
| 500 | 79.51 | atmosphere | 1010 | 4320 | > th | dose dependent | sin | 2 | NA |
| 529 | 79.52 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 13 | 21 |
| 536 | 79.53 | atmosphere | 1010 | 4320 | > th | dose dependent | no | NA | NA |
| 605 | 79.55 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 682 | 79.59 | temperature | 15 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 722 | 79.61 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 9 | 6 |
| 723 | 79.61 | atmosphere | 1010 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 730 | 79.61 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 747 | 79.62 | humidity | 50 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 748 | 79.62 | humidity | 50 | 14400 | > th | dose independent | rect. | 23 | 16 |
| 750 | 79.62 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 22 |
| 770 | 79.63 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 773 | 79.63 | humidity | 50 | 14400 | > th | dose independent | rect. | 2 | 13 |
| 811 | 79.65 | humidity | 50 | 14400 | < th | dose independent | sin | 4 | NA |
| 812 | 79.65 | temperature | 15 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 841 | 79.66 | temperature | 15 | 4320 | < th | dose dependent | rect. | 12 | 6 |
| 997 | 79.78 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 15 | 1 |