Os10g0391100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0391100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.87 | 0.265 | 11 | 1.08 | 0.142 | 0.38 | -0.231 | 2.28 | 0.439 | 19.9 | 19.3 | 2163 | -- | -- |
| 37.01 | 0.283 | 11.1 | 0.498 | 0.0259 | 0.53 | -0.213 | -- | 0.284 | 18.2 | 20.15 | 747 | -- | -- |
| 32.01 | 0.264 | 11 | 1.08 | 0.141 | 0.378 | -- | 2.23 | 0.435 | 20.2 | 19.27 | 2141 | -- | -- |
| 35.91 | 0.279 | 11.1 | 0.453 | 0.225 | 0.458 | -- | -- | 0.286 | 19.6 | 22.16 | 2879 | -- | -- |
| 33.08 | 0.268 | 11 | 1.05 | -- | 0.426 | -- | 2.21 | 0.422 | -- | 19 | 2141 | -- | -- |
| 42.07 | 0.304 | 11 | 0.629 | 0.194 | -- | 0.0446 | -- | 0.367 | 20.8 | -- | -- | -- | -- |
| 42.08 | 0.304 | 11 | 0.627 | 0.195 | -- | -- | -- | 0.368 | 20.7 | -- | -- | -- | -- |
| 36.46 | 0.281 | 11 | 0.471 | -- | 0.494 | -- | -- | 0.306 | -- | 24.68 | 2147 | -- | -- |
| 40.19 | 0.295 | 11.1 | -- | 0.168 | 0.639 | -- | -- | 0.198 | 19.3 | 19.9 | 3825 | -- | -- |
| 44.22 | 0.311 | 11 | 0.627 | -- | -- | -- | -- | 0.366 | -- | -- | -- | -- | -- |
| 52.46 | 0.339 | 11.1 | -- | 0.193 | -- | -- | -- | 0.298 | 21 | -- | -- | -- | -- |
| 41.5 | 0.3 | 11.1 | -- | -- | 0.65 | -- | -- | 0.192 | -- | 20.28 | 3703 | -- | -- |
| 54.6 | 0.345 | 11 | -- | -- | -- | -- | -- | 0.296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.26 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 4 | 30.30 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 217 | 31.47 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 233 | 31.51 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 263 | 31.57 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 341 | 31.71 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 406 | 31.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 20 |
| 594 | 32.02 | temperature | 30 | 4320 | < th | dose dependent | sin | 15 | NA |
| 699 | 32.12 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 721 | 32.13 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 13 |
| 732 | 32.14 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 748 | 32.16 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 765 | 32.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 801 | 32.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 858 | 32.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 895 | 32.26 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 909 | 32.26 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 20 |
| 960 | 32.29 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 15 |