Os10g0390900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Synaptojanin, N-terminal domain containing protein.
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Os10g0390900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Synaptojanin, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.92 | 0.628 | 3.19 | 1.66 | 0.61 | -0.746 | 1.45 | -3.3 | 0.0429 | 11.4 | 23.37 | 3774 | -- | -- |
| 195.68 | 0.652 | 3.24 | 0.726 | 0.553 | -0.646 | 1.45 | -- | 0.159 | 11 | 31.57 | 5723 | -- | -- |
| 186.52 | 0.636 | 3.21 | 1.72 | 0.542 | -0.712 | -- | -3.1 | 0.0396 | 10.9 | 22.9 | 3095 | -- | -- |
| 201.68 | 0.661 | 3.25 | 0.733 | 0.53 | -0.653 | -- | -- | 0.106 | 11 | 31.5 | 5843 | -- | -- |
| 203.75 | 0.665 | 3.22 | 1.73 | -- | -0.7 | -- | -3.15 | 0.0364 | -- | 22.97 | 3073 | -- | -- |
| 217.42 | 0.691 | 3.27 | 0.872 | 0.517 | -- | 1.15 | -- | 0.0284 | 11.1 | -- | -- | -- | -- |
| 222.89 | 0.699 | 3.27 | 0.917 | 0.516 | -- | -- | -- | 0.0311 | 10.7 | -- | -- | -- | -- |
| 218.11 | 0.688 | 3.25 | 0.725 | -- | -0.681 | -- | -- | 0.114 | -- | 31.49 | 5878 | -- | -- |
| 215.27 | 0.683 | 3.26 | -- | 0.539 | -0.735 | -- | -- | 0.0726 | 11.1 | 31.46 | 5756 | -- | -- |
| 239.36 | 0.723 | 3.28 | 0.907 | -- | -- | -- | -- | 0.0283 | -- | -- | -- | -- | -- |
| 245.06 | 0.732 | 3.29 | -- | 0.51 | -- | -- | -- | -0.071 | 10.6 | -- | -- | -- | -- |
| 231.09 | 0.708 | 3.27 | -- | -- | -0.793 | -- | -- | 0.0561 | -- | 31.5 | 5878 | -- | -- |
| 261.07 | 0.754 | 3.3 | -- | -- | -- | -- | -- | -0.0724 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 4 |
| 3 | 164.77 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 31 | 172.75 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 32 | 172.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 7 |
| 92 | 175.53 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 151 | 176.83 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 2 |
| 157 | 176.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 215 | 177.98 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 233 | 178.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 14 |
| 302 | 178.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 21 |
| 459 | 180.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 495 | 180.43 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 496 | 180.43 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 499 | 180.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 519 | 180.53 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 557 | 180.66 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 5 |
| 679 | 181.03 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 16 |
| 744 | 181.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 757 | 181.24 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 758 | 181.25 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 797 | 181.33 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 809 | 181.38 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 966 | 181.64 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 990 | 181.69 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |